RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PPP2R5EQ16537 467 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 CDCP2Q5VXM1 449 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 ATG4CQ96DT6 458 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 KIRREL1Q96J84 757 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 Q96M66 194 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 DNAJC2Q99543 621 aaKnown RBP5.88□□□□□ -1.47
CBX3-207ENST00000481300 FAM53CQ9NYF3 392 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 PRKAG3Q9UGI9 489 aa5.88□□□□□ -1.47
CBX3-207ENST00000481300 WASH4PA8MWX3 477 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 SMAD7O15105 426 aaKnown RBP5.87□□□□□ -1.47
CBX3-207ENST00000481300 DNAJA2O60884 412 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 ESR1P03372 595 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 GLI1P08151 1106 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 NME1P15531 152 aaKnown RBP5.87□□□□□ -1.47
CBX3-207ENST00000481300 GUCY2CP25092 1073 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 GBP1P32455 592 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 PKN1Q16512 942 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 SOGA3Q5TF21 947 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 RUFY4Q6ZNE9 571 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 ANKS3Q6ZW76 656 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 PPP1R13LQ8WUF5 828 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 CYB5D2Q8WUJ1 264 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 FAM84AQ96KN4 292 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 CCDC74BQ96LY2 380 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 ALPK1Q96QP1 1244 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 TRIM55Q9BYV6 548 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 CNNM2Q9H8M5 875 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 SLC12A7Q9Y666 1083 aa5.87□□□□□ -1.47
CBX3-207ENST00000481300 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
CBX3-207ENST00000481300 IGSF3O75054 1194 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 ETV3P41162 512 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 INTS3Q68E01 1043 aaKnown RBP5.86□□□□□ -1.47
CBX3-207ENST00000481300 PRR23BQ6ZRT6 265 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 CILP2Q8IUL8 1156 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 TAB3Q8N5C8 712 aaPredicted RBP5.86□□□□□ -1.47
CBX3-207ENST00000481300 FAM169BQ8N8A8 192 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 C19orf47Q8N9M1 422 aaKnown RBP5.86□□□□□ -1.47
CBX3-207ENST00000481300 PMFBP1Q8TBY8 1022 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 PIWIL2Q8TC59 973 aaKnown RBP5.86□□□□□ -1.47
CBX3-207ENST00000481300 SLC38A3Q99624 504 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 KIF2CQ99661 725 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 DUSP15Q9H1R2 295 aaPredicted RBP5.86□□□□□ -1.47
CBX3-207ENST00000481300 ACTR10Q9NZ32 417 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 SLAMF8Q9P0V8 285 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 CEP131Q9UPN4 1083 aa5.86□□□□□ -1.47
CBX3-207ENST00000481300 DNAJC25-GNG10A0A024R161 153 aa5.85□□□□□ -1.47
CBX3-207ENST00000481300 FAM86C2PA6NEL3 165 aa5.85□□□□□ -1.47
CBX3-207ENST00000481300 TNFRSF10CO14798 259 aa5.85□□□□□ -1.47
CBX3-207ENST00000481300 CCNFP41002 786 aa5.85□□□□□ -1.47
CBX3-207ENST00000481300 TMEM67Q5HYA8 995 aa5.85□□□□□ -1.47
CBX3-207ENST00000481300 RALGPS1Q5JS13 557 aa5.85□□□□□ -1.47
CBX3-207ENST00000481300 TTC6Q86TZ1 520 aa5.85□□□□□ -1.47
CBX3-207ENST00000481300 HNRNPLLQ8WVV9 542 aaKnown RBP5.85□□□□□ -1.47
CBX3-207ENST00000481300 RGS13O14921 159 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 POLR2BP30876 1174 aaKnown RBP5.84□□□□□ -1.47
CBX3-207ENST00000481300 CASP7P55210 303 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 RBL2Q08999 1139 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 GAB4Q2WGN9 574 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 NBPF6Q5VWK0 638 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 LARP1BQ659C4 914 aaKnown RBP5.84□□□□□ -1.47
CBX3-207ENST00000481300 MPZL3Q6UWV2 235 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 SPOCD1Q6ZMY3 1216 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 TMPRSS7Q7RTY8 843 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 BHLHE22Q8NFJ8 381 aaPredicted RBP5.84□□□□□ -1.47
CBX3-207ENST00000481300 DHRS1Q96LJ7 313 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 NBPF4Q96M43 638 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 SLC9A7Q96T83 725 aa5.84□□□□□ -1.47
CBX3-207ENST00000481300 A0A1W2PQH9 124 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 CLEC3AO75596 197 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 ACRP10323 421 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 SRFP11831 508 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 ERVFC1P60507 584 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 FXNQ16595 210 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 UNC5AQ6ZN44 842 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 DTWD2Q8NBA8 298 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 BAHD1Q8TBE0 780 aaPredicted RBP5.83□□□□□ -1.48
CBX3-207ENST00000481300 CCDC120Q96HB5 630 aa5.83□□□□□ -1.48
CBX3-207ENST00000481300 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.83□□□□□ -1.48
CBX3-207ENST00000481300 PHAXQ9H814 394 aaKnown RBP5.83□□□□□ -1.48
CBX3-207ENST00000481300 KRT1P04264 644 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 TPP2P29144 1249 aaPredicted RBP5.82□□□□□ -1.48
CBX3-207ENST00000481300 HK2P52789 917 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 RAB33AQ14088 237 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 ZYXQ15942 572 aaKnown RBP5.82□□□□□ -1.48
CBX3-207ENST00000481300 CREG2Q8IUH2 290 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 SLC6A18Q96N87 628 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 ADAMTS10Q9H324 1103 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 TMEM59LQ9UK28 342 aa5.82□□□□□ -1.48
CBX3-207ENST00000481300 KLF4O43474 513 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 LRRN2O75325 713 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 DDAH1O94760 285 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 UBOX5O94941 541 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 TSPAN15O95858 294 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 RNF4P78317 190 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 BBS9Q3SYG4 887 aa5.81□□□□□ -1.48
CBX3-207ENST00000481300 SYDE1Q6ZW31 735 aaPredicted RBP5.81□□□□□ -1.48
CBX3-207ENST00000481300 ABHD4Q8TB40 342 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms