RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 GMCL1Q96IK5 515 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 FEZ1Q99689 392 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 WDR18Q9BV38 432 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 ZNF408Q9H9D4 720 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 AS3MTQ9HBK9 375 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.4■□□□□ 0.86
UPF3A-206ENST00000480362 CSADQ9Y600 493 aa20.4■□□□□ 0.86
UPF3A-206ENST00000480362 V9GY48 417 aaPredicted RBP20.4■□□□□ 0.86
UPF3A-206ENST00000480362 STX6O43752 255 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 SMARCA1P28370 1054 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 SLC35G1Q2M3R5 365 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 KIAA1755Q5JYT7 1200 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 CHADLQ6NUI6 762 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 KCTD1Q719H9 257 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 ANKRD13AQ8IZ07 590 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 ALG1Q9BT22 464 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 CPVLQ9H3G5 476 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 VCPKMTQ9H867 229 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
UPF3A-206ENST00000480362 SNCAIPQ9Y6H5 919 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 ZHX2Q9Y6X8 837 aa20.39■□□□□ 0.85
UPF3A-206ENST00000480362 UBE2Q2LH0YL09 131 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 DEXIO95424 95 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 FOSBP53539 338 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 SPP2Q13103 211 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 TTBK2Q6IQ55 1244 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 SPICE1Q8N0Z3 855 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 ZNF280CQ8ND82 737 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 WASF1Q92558 559 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 AIFM3Q96NN9 605 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 KIAA1683Q9H0B3 1180 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
UPF3A-206ENST00000480362 ZDHHC9Q9Y397 364 aa20.38■□□□□ 0.85
UPF3A-206ENST00000480362 hCG_1642624A0A1W2PR95 340 aa20.37■□□□□ 0.85
UPF3A-206ENST00000480362 USP17L10C9JJH3 530 aa20.37■□□□□ 0.85
UPF3A-206ENST00000480362 CYTH3O43739 400 aa20.37■□□□□ 0.85
UPF3A-206ENST00000480362 BMP3P12645 472 aa20.37■□□□□ 0.85
UPF3A-206ENST00000480362 PDIA4P13667 645 aaKnown RBP20.37■□□□□ 0.85
UPF3A-206ENST00000480362 PIBF1Q8WXW3 757 aa20.37■□□□□ 0.85
UPF3A-206ENST00000480362 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
UPF3A-206ENST00000480362 SPZ1Q9BXG8 430 aa20.37■□□□□ 0.85
UPF3A-206ENST00000480362 VAT1LQ9HCJ6 419 aa20.37■□□□□ 0.85
UPF3A-206ENST00000480362 PAPPA2Q9BXP8 1791 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 WDR33Q9C0J8 1336 aaKnown RBP20.36■□□□□ 0.85
UPF3A-206ENST00000480362 VPS37CA5D8V6 355 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-206ENST00000480362 BRD1O95696 1058 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 ITGBL1O95965 494 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-206ENST00000480362 PKN1Q16512 942 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 CLMNQ96JQ2 1002 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 C8orf76Q96K31 380 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 RIOX1Q9H6W3 641 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 ELP3Q9H9T3 547 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 RBM27Q9P2N5 1060 aaKnown RBP20.36■□□□□ 0.85
UPF3A-206ENST00000480362 MTMR6Q9Y217 621 aa20.36■□□□□ 0.85
UPF3A-206ENST00000480362 TMEM232C9JQI7 657 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 H3BQV1 296 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 SLC16A2P36021 539 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 BACE1P56817 501 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 MTMR2Q13614 643 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 FAM83BQ5T0W9 1011 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 LDLRAD1Q5T700 205 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 FOXD4L5Q5VV16 416 aaPredicted RBP20.35■□□□□ 0.85
UPF3A-206ENST00000480362 FOXD4L4Q8WXT5 416 aaPredicted RBP20.35■□□□□ 0.85
UPF3A-206ENST00000480362 EMILIN3Q9NT22 766 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 AFG3L2Q9Y4W6 797 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 OTOFQ9HC10 1997 aa20.35■□□□□ 0.85
UPF3A-206ENST00000480362 TRIM75PA6NK02 468 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 C19orf81C9J6K1 198 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 CELF2O95319 508 aaKnown RBP20.34■□□□□ 0.85
UPF3A-206ENST00000480362 ZSCAN22P10073 491 aaPredicted RBP20.34■□□□□ 0.85
UPF3A-206ENST00000480362 USP14P54578 494 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 GUCY1B3Q02153 619 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 OTUD7BQ6GQQ9 843 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 ADGRF4Q8IZF3 695 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 RRP36Q96EU6 259 aaKnown RBP20.34■□□□□ 0.85
UPF3A-206ENST00000480362 GBA2Q9HCG7 927 aaPredicted RBP20.34■□□□□ 0.85
UPF3A-206ENST00000480362 GJB4Q9NTQ9 266 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 PHIPQ8WWQ0 1821 aa20.34■□□□□ 0.85
UPF3A-206ENST00000480362 FKBP1BP68106 108 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 DGKZQ13574 1117 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 PFKFB3Q16875 520 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-206ENST00000480362 ERO1BQ86YB8 467 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 FBXO18Q8NFZ0 1043 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 LPAR1Q92633 364 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 PIGSQ96S52 555 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 JMJD4Q9H9V9 463 aa20.33■□□□□ 0.85
UPF3A-206ENST00000480362 MYH6P13533 1939 aa20.33■□□□□ 0.84
UPF3A-206ENST00000480362 UNCXA6NJT0 531 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 SCG2P13521 617 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 PPATQ06203 517 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 IKQ13123 557 aaPredicted RBP20.32■□□□□ 0.84
UPF3A-206ENST00000480362 TRIM29Q14134 588 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 KRT40Q6A162 431 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 BTNL9Q6UXG8 535 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 C2orf69Q8N8R5 385 aa20.32■□□□□ 0.84
UPF3A-206ENST00000480362 RGS22Q8NE09 1264 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms