RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 PLAGL2Q9UPG8 496 aa6.87□□□□□ -1.31
SSR1-207ENST00000479485 B2RBV5 119 aa6.86□□□□□ -1.31
SSR1-207ENST00000479485 TNK2Q07912 1038 aa6.86□□□□□ -1.31
SSR1-207ENST00000479485 IFI16Q16666 785 aaKnown RBP6.86□□□□□ -1.31
SSR1-207ENST00000479485 NKPD1Q17RQ9 610 aa6.86□□□□□ -1.31
SSR1-207ENST00000479485 CKAP2LQ8IYA6 745 aa6.86□□□□□ -1.31
SSR1-207ENST00000479485 FBXL18Q96ME1 805 aa6.86□□□□□ -1.31
SSR1-207ENST00000479485 ZNF214Q9UL59 606 aaPredicted RBP6.86□□□□□ -1.31
SSR1-207ENST00000479485 R3HCC1Q9Y3T6 440 aaKnown RBP6.86□□□□□ -1.31
SSR1-207ENST00000479485 TP53P04637 393 aaPredicted RBP6.85□□□□□ -1.31
SSR1-207ENST00000479485 GNPTABQ3T906 1256 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 CDKAL1Q5VV42 579 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 VHLLQ6RSH7 139 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 CCDC144CPQ8IYA2 1237 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 NETO1Q8TDF5 533 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 KLHL6Q8WZ60 621 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 DNAJC2Q99543 621 aaKnown RBP6.85□□□□□ -1.31
SSR1-207ENST00000479485 CCDC39Q9UFE4 941 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 KCNH3Q9ULD8 1083 aa6.85□□□□□ -1.31
SSR1-207ENST00000479485 ANGEL1Q9UNK9 670 aaKnown RBP6.85□□□□□ -1.31
SSR1-207ENST00000479485 KLF4O43474 513 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 CLCN7P51798 805 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 SNW1Q13573 536 aaKnown RBP6.84□□□□□ -1.31
SSR1-207ENST00000479485 BBS9Q3SYG4 887 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 DCAF15Q66K64 600 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
SSR1-207ENST00000479485 CELF2-AS1Q8N7Q2 184 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 PIWIL2Q8TC59 973 aaKnown RBP6.84□□□□□ -1.31
SSR1-207ENST00000479485 UBXN4Q92575 508 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 SMARCC1Q92922 1105 aaPredicted RBP6.84□□□□□ -1.31
SSR1-207ENST00000479485 HIRIP3Q9BW71 556 aaPredicted RBP6.84□□□□□ -1.31
SSR1-207ENST00000479485 TRIM55Q9BYV6 548 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 JAG2Q9Y219 1238 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 ST14Q9Y5Y6 855 aa6.84□□□□□ -1.31
SSR1-207ENST00000479485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
SSR1-207ENST00000479485 H3BS24 57 aa6.83□□□□□ -1.32
SSR1-207ENST00000479485 SHOXO15266 292 aa6.83□□□□□ -1.32
SSR1-207ENST00000479485 SLC7A5Q01650 507 aa6.83□□□□□ -1.32
SSR1-207ENST00000479485 DDR2Q16832 855 aa6.83□□□□□ -1.32
SSR1-207ENST00000479485 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
SSR1-207ENST00000479485 PMFBP1Q8TBY8 1022 aa6.83□□□□□ -1.32
SSR1-207ENST00000479485 MICAL1Q8TDZ2 1067 aa6.83□□□□□ -1.32
SSR1-207ENST00000479485 USP35Q9P2H5 1018 aa6.83□□□□□ -1.32
SSR1-207ENST00000479485 TMEM265A0A087WTH1 108 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 SHISA3A0PJX4 238 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 PAPLNO95428 1278 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 ZEB1P37275 1124 aaPredicted RBP6.82□□□□□ -1.32
SSR1-207ENST00000479485 AUHQ13825 339 aaKnown RBP6.82□□□□□ -1.32
SSR1-207ENST00000479485 RAB33AQ14088 237 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 FXNQ16595 210 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 NBPF9Q3BBW0 867 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 KIAA1211LQ6NV74 962 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 HRASLS5Q96KN8 279 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 HSPA12BQ96MM6 686 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 HAUS7Q99871 368 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 ST7Q9NRC1 585 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 BSDC1Q9NW68 430 aaPredicted RBP6.82□□□□□ -1.32
SSR1-207ENST00000479485 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
SSR1-207ENST00000479485 PITPNM2Q9BZ72 1349 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 CBFA2T2O43439 604 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 NMIQ13287 307 aaPredicted RBP6.81□□□□□ -1.32
SSR1-207ENST00000479485 TMC3Q7Z5M5 1100 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 TP53INP2Q8IXH6 220 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 FAM178BQ8IXR5 827 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 C7orf61Q8IZ16 206 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 PRDM14Q9GZV8 571 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 FBXL21Q9UKT6 434 aa6.81□□□□□ -1.32
SSR1-207ENST00000479485 DDAH1O94760 285 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 GJB6O95452 261 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 EPHX1P07099 455 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 CD96P40200 585 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 PRKCQQ04759 706 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 RBL2Q08999 1139 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 NCAPHQ15003 741 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 AOC3Q16853 763 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 NBPF6Q5VWK0 638 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 MRM1Q6IN84 353 aaKnown RBP6.8□□□□□ -1.32
SSR1-207ENST00000479485 THAP5Q7Z6K1 395 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 VSIG10LQ86VR7 867 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 MISP3Q96FF7 219 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 NBPF4Q96M43 638 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 GPR62Q9BZJ7 368 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 ASCC2Q9H1I8 757 aaPredicted RBP6.8□□□□□ -1.32
SSR1-207ENST00000479485 SEMA3GQ9NS98 782 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 GFOD1Q9NXC2 390 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 SNX11Q9Y5W9 270 aa6.8□□□□□ -1.32
SSR1-207ENST00000479485 CARMIL2Q6F5E8 1435 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 WASH4PA8MWX3 477 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 U2SURPO15042 1029 aaKnown RBP6.79□□□□□ -1.32
SSR1-207ENST00000479485 SIGLEC6O43699 453 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 PRAMEF1O95521 474 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 PRNPP04156 253 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 SRFP11831 508 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 SERINC3Q13530 473 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 HEATR6Q6AI08 1181 aaKnown RBP6.79□□□□□ -1.32
SSR1-207ENST00000479485 BCL7CQ8WUZ0 217 aaPredicted RBP6.79□□□□□ -1.32
SSR1-207ENST00000479485 UBE2FQ969M7 185 aa6.79□□□□□ -1.32
SSR1-207ENST00000479485 HDAC8Q9BY41 377 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms