RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 LRRFIP1Q32MZ4 808 aaKnown RBP7.99□□□□□ -1.13
USP48-208ENST00000479177 SRCAPQ6ZRS2 3230 aa7.99□□□□□ -1.13
USP48-208ENST00000479177 ZNF589Q86UQ0 364 aaPredicted RBP7.99□□□□□ -1.13
USP48-208ENST00000479177 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
USP48-208ENST00000479177 ZC3H12CQ9C0D7 883 aaKnown RBP7.99□□□□□ -1.13
USP48-208ENST00000479177 DNAAF2Q9NVR5 837 aaKnown RBP7.99□□□□□ -1.13
USP48-208ENST00000479177 GOLGB1Q14789 3259 aaKnown RBP7.99□□□□□ -1.13
USP48-208ENST00000479177 FAM205AQ6ZU69 1335 aa7.99□□□□□ -1.13
USP48-208ENST00000479177 SPATA31C2B4DYI2 1134 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 M0R2C6 588 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 IGSF3O75054 1194 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 DKK1O94907 266 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 SMTNP53814 917 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 MAP3K12Q12852 859 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 UBE3CQ15386 1083 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 AOC3Q16853 763 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 CRTC2Q53ET0 693 aaPredicted RBP7.98□□□□□ -1.13
USP48-208ENST00000479177 C4orf17Q53FE4 359 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 SLC9C2Q5TAH2 1124 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 ZSCAN25Q6NSZ9 544 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 TMEM214Q6NUQ4 689 aaKnown RBP7.98□□□□□ -1.13
USP48-208ENST00000479177 TAS1R3Q7RTX0 852 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 WDR66Q8TBY9 1149 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 APPBP2Q92624 585 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 OSBP2Q969R2 916 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 ZNF837Q96EG3 531 aaPredicted RBP7.98□□□□□ -1.13
USP48-208ENST00000479177 SEC62Q99442 399 aaKnown RBP7.98□□□□□ -1.13
USP48-208ENST00000479177 LSG1Q9H089 658 aaKnown RBP7.98□□□□□ -1.13
USP48-208ENST00000479177 UPF2Q9HAU5 1272 aaKnown RBP7.98□□□□□ -1.13
USP48-208ENST00000479177 ANO2Q9NQ90 1003 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 ENAMQ9NRM1 1142 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 HELLSQ9NRZ9 838 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 JAG2Q9Y219 1238 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 CCDC171Q6TFL3 1326 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 ZNF532Q9HCE3 1301 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
USP48-208ENST00000479177 MYH2Q9UKX2 1941 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 LAMA4Q16363 1823 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 SFI1A8K8P3 1242 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 PHF20L1A8MW92 1017 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 NFKBIEO00221 500 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 PPIP5K2O43314 1243 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
USP48-208ENST00000479177 ECE2O60344 883 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 LGR5O75473 907 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 RASA1P20936 1047 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 PRDX5P30044 214 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 RBM25P49756 843 aaKnown RBP7.97□□□□□ -1.13
USP48-208ENST00000479177 MCMDC2Q4G0Z9 681 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 TBCELQ5QJ74 424 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 TMED8Q6PL24 325 aaPredicted RBP7.97□□□□□ -1.13
USP48-208ENST00000479177 CCDC129Q6ZRS4 1044 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 TRIM50Q86XT4 487 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 ZGPATQ8N5A5 531 aaKnown RBP7.97□□□□□ -1.13
USP48-208ENST00000479177 BEND7Q8N7W2 519 aaPredicted RBP7.97□□□□□ -1.13
USP48-208ENST00000479177 MAGEB6Q8N7X4 407 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 ZNF384Q8TF68 577 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 ACDQ96AP0 544 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 GAS2L1Q99501 681 aaPredicted RBP7.97□□□□□ -1.13
USP48-208ENST00000479177 USP26Q9BXU7 913 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 C22orf23Q9BZE7 217 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 VPS33BQ9H267 617 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 TAOK3Q9H2K8 898 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 DBNDD1Q9H9R9 158 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 ZNF277Q9NRM2 450 aaPredicted RBP7.97□□□□□ -1.13
USP48-208ENST00000479177 RAI14Q9P0K7 980 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 LRP2BPQ9P2M1 347 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 ABCF2Q9UG63 623 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 BCS1LQ9Y276 419 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 ADAMTSL1Q8N6G6 1762 aa7.97□□□□□ -1.13
USP48-208ENST00000479177 A6NJY4 79 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
USP48-208ENST00000479177 BCRP11274 1271 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 IARSP41252 1262 aaKnown RBP7.96□□□□□ -1.14
USP48-208ENST00000479177 MECOMQ03112 1051 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 PTH1RQ03431 593 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 GRIK5Q16478 980 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 DBN1Q16643 649 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 MFSD14BQ5SR56 506 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 SPTY2D1Q68D10 685 aaPredicted RBP7.96□□□□□ -1.14
USP48-208ENST00000479177 ERICH6Q7L0X2 663 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 PODNQ7Z5L7 613 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 ADGRA1Q86SQ6 560 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 TNS4Q8IZW8 715 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 CERS5Q8N5B7 392 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 TBC1D22AQ8WUA7 517 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 NSUN4Q96CB9 384 aaKnown RBP7.96□□□□□ -1.14
USP48-208ENST00000479177 PUS7LQ9H0K6 701 aaKnown RBP7.96□□□□□ -1.14
USP48-208ENST00000479177 GPAMQ9HCL2 828 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 TIMMDC1Q9NPL8 285 aa7.96□□□□□ -1.14
USP48-208ENST00000479177 RBM19Q9Y4C8 960 aaKnown RBP7.96□□□□□ -1.14
USP48-208ENST00000479177 DICER1Q9UPY3 1922 aaKnown RBP7.95□□□□□ -1.14
USP48-208ENST00000479177 YDJCA8MPS7 323 aa7.95□□□□□ -1.14
USP48-208ENST00000479177 FOXP2O15409 715 aa7.95□□□□□ -1.14
USP48-208ENST00000479177 GPAA1O43292 621 aa7.95□□□□□ -1.14
USP48-208ENST00000479177 MBD4O95243 580 aa7.95□□□□□ -1.14
USP48-208ENST00000479177 LDHBP07195 334 aaKnown RBP7.95□□□□□ -1.14
USP48-208ENST00000479177 CYP7A1P22680 504 aa7.95□□□□□ -1.14
USP48-208ENST00000479177 ATP1A2P50993 1020 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms