RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 L1RE1Q9UN81 338 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
CCDC78-210ENST00000478979 TRIM75PA6NK02 468 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 USP17L8P0C7I0 530 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 E2F4Q16254 413 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 PKN1Q16512 942 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 PIK3AP1Q6ZUJ8 805 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 RASGRP4Q8TDF6 673 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 CCDC102AQ96A19 550 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 BLZF1Q9H2G9 400 aa15.95■□□□□ 0.14
CCDC78-210ENST00000478979 FOXP1Q9H334 677 aaPredicted RBP15.95■□□□□ 0.14
CCDC78-210ENST00000478979 MYH6P13533 1939 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 TSPY2A6NKD2 308 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 USP5P45974 858 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 STX10O60499 249 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 MCM7P33993 719 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 KRT2P35908 639 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
CCDC78-210ENST00000478979 TMTC2Q8N394 836 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 SYMPKQ92797 1274 aaKnown RBP15.94■□□□□ 0.14
CCDC78-210ENST00000478979 GPKOWQ92917 476 aaPredicted RBP eCLIP15.94■□□□□ 0.14
CCDC78-210ENST00000478979 DYNLL2Q96FJ2 89 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 SETDB2Q96T68 719 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 MRPL44Q9H9J2 332 aaKnown RBP15.94■□□□□ 0.14
CCDC78-210ENST00000478979 BSDC1Q9NW68 430 aaPredicted RBP15.94■□□□□ 0.14
CCDC78-210ENST00000478979 MCM9Q9NXL9 1143 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 RAB21Q9UL25 225 aa15.94■□□□□ 0.14
CCDC78-210ENST00000478979 COL16A1Q07092 1604 aaPredicted RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 ERLIN1O75477 346 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 MAPK8IP1Q9UQF2 711 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 CICQ96RK0 1608 aaPredicted RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 XBP1P17861 261 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 MMP14P50281 582 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 DIXDC1Q155Q3 683 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 HSP90B2PQ58FF3 399 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 RASGRP2Q7LDG7 609 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 TC2NQ8N9U0 490 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 ANKIB1Q9P2G1 1089 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 HIBADHP31937 336 aaKnown RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 NLRP5P59047 1200 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 MDM2Q00987 491 aaPredicted RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 TBX2Q13207 712 aaPredicted RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 UBE4AQ14139 1066 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 SRBD1Q8N5C6 995 aaKnown RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 MSANTD4Q8NCY6 345 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 NSUN4Q96CB9 384 aaKnown RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 NLRP3Q96P20 1036 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 PLIN2Q99541 437 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 CPVLQ9H3G5 476 aa15.93■□□□□ 0.14
CCDC78-210ENST00000478979 HOOK1Q9UJC3 728 aaKnown RBP15.93■□□□□ 0.14
CCDC78-210ENST00000478979 ZPR1O75312 459 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 DZIP1Q86YF9 867 aaKnown RBP15.92■□□□□ 0.14
CCDC78-210ENST00000478979 CTCFLQ8NI51 663 aaPredicted RBP15.92■□□□□ 0.14
CCDC78-210ENST00000478979 NGLY1Q96IV0 654 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 RHOXF2BP0C7M4 288 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 PSEN1P49768 467 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 CASP8Q14790 479 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 MTF1Q14872 753 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 MSL3Q8N5Y2 521 aaKnown RBP15.92■□□□□ 0.14
CCDC78-210ENST00000478979 SLC44A5Q8NCS7 719 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 FAM71BQ8TC56 605 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 RHOXF2Q9BQY4 288 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
CCDC78-210ENST00000478979 LZTFL1Q9NQ48 299 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 SAP30BPQ9UHR5 308 aaKnown RBP15.92■□□□□ 0.14
CCDC78-210ENST00000478979 SRPRBQ9Y5M8 271 aaKnown RBP15.92■□□□□ 0.14
CCDC78-210ENST00000478979 RTL9Q8NET4 1388 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 ZNF804BA4D1E1 1349 aa15.92■□□□□ 0.14
CCDC78-210ENST00000478979 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 TROAPQ12815 778 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 MED15Q96RN5 788 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 RNF26Q9BY78 433 aaPredicted RBP15.91■□□□□ 0.14
CCDC78-210ENST00000478979 FAM204AQ9H8W3 233 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 LRP5O75197 1615 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 SPATA31A5Q5VU36 1347 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 SPATA31A7Q8IWB4 1347 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 ACTN4O43707 911 aaKnown RBP15.91■□□□□ 0.14
CCDC78-210ENST00000478979 VSNL1P62760 191 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 PTGDRQ13258 359 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 DOCK2Q92608 1830 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 PHLPP1O60346 1717 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 SUGP1Q8IWZ8 645 aaKnown RBP15.91■□□□□ 0.14
CCDC78-210ENST00000478979 EFCAB13Q8IY85 973 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 CEP112Q8N8E3 955 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 CDC23Q9UJX2 597 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 CEP131Q9UPN4 1083 aa15.91■□□□□ 0.14
CCDC78-210ENST00000478979 TEX33O43247 280 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 TFRCP02786 760 aaKnown RBP15.9■□□□□ 0.14
CCDC78-210ENST00000478979 CD44P16070 742 aaKnown RBP15.9■□□□□ 0.14
CCDC78-210ENST00000478979 GRIK5Q16478 980 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 SKIDA1Q1XH10 827 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 CDCA7Q9BWT1 371 aaPredicted RBP15.9■□□□□ 0.14
CCDC78-210ENST00000478979 PPFIA4O75335 1185 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 CPP00450 1065 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 TTC38Q5R3I4 469 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 MMS22LQ6ZRQ5 1243 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 TADA2BQ86TJ2 420 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 RASSF8Q8NHQ8 419 aa15.9■□□□□ 0.14
CCDC78-210ENST00000478979 SMARCC1Q92922 1105 aaPredicted RBP15.9■□□□□ 0.14
CCDC78-210ENST00000478979 EEF2KMTQ96G04 330 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms