RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 COG5Q9UP83 839 aa17.54■□□□□ 0.4
USP11-207ENST00000478596 ROBO3Q96MS0 1386 aa17.53■□□□□ 0.4
USP11-207ENST00000478596 SPDYE16A6NNV3 312 aaPredicted RBP17.53■□□□□ 0.4
USP11-207ENST00000478596 POU3F3P20264 500 aaPredicted RBP17.53■□□□□ 0.4
USP11-207ENST00000478596 TFCP2Q12800 502 aa17.53■□□□□ 0.4
USP11-207ENST00000478596 ZNF365Q70YC5 407 aa17.53■□□□□ 0.4
USP11-207ENST00000478596 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
USP11-207ENST00000478596 MICALL1Q8N3F8 863 aa17.53■□□□□ 0.4
USP11-207ENST00000478596 KIF1BPQ96EK5 621 aa17.53■□□□□ 0.4
USP11-207ENST00000478596 TSEN34Q9BSV6 310 aaKnown RBP17.53■□□□□ 0.4
USP11-207ENST00000478596 YBX2Q9Y2T7 364 aaKnown RBP17.53■□□□□ 0.4
USP11-207ENST00000478596 MYO9BQ13459 2157 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 SIPA1L1O43166 1804 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 PRR33A8MZF0 331 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 PGK1P00558 417 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 IGHDP01880 384 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 CSF2RAP15509 400 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 VCAM1P19320 739 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 USP14P54578 494 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 SKIV2LQ15477 1246 aaKnown RBP17.52■□□□□ 0.4
USP11-207ENST00000478596 ABRAQ8N0Z2 381 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
USP11-207ENST00000478596 TMEM199Q8N511 208 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 SHCBP1Q8NEM2 672 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 MOV10L1Q9BXT6 1211 aaKnown RBP17.52■□□□□ 0.4
USP11-207ENST00000478596 TRIM34Q9BYJ4 488 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 KIAA1683Q9H0B3 1180 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 NOP58Q9Y2X3 529 aaKnown RBP17.52■□□□□ 0.4
USP11-207ENST00000478596 TRANK1O15050 2925 aa17.52■□□□□ 0.4
USP11-207ENST00000478596 ANKRD45Q5TZF3 282 aa17.51■□□□□ 0.39
USP11-207ENST00000478596 CLASRPQ8N2M8 674 aaKnown RBP17.51■□□□□ 0.39
USP11-207ENST00000478596 RHPN1Q8TCX5 695 aa17.51■□□□□ 0.39
USP11-207ENST00000478596 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
USP11-207ENST00000478596 NUP133Q8WUM0 1156 aa17.51■□□□□ 0.39
USP11-207ENST00000478596 MAML3Q96JK9 1138 aa17.51■□□□□ 0.39
USP11-207ENST00000478596 FEZ1Q99689 392 aa17.51■□□□□ 0.39
USP11-207ENST00000478596 MTIF3Q9H2K0 278 aaKnown RBP17.51■□□□□ 0.39
USP11-207ENST00000478596 STARD7Q9NQZ5 370 aa17.51■□□□□ 0.39
USP11-207ENST00000478596 AKAP2Q9Y2D5 859 aa17.51■□□□□ 0.39
USP11-207ENST00000478596 MROH7Q68CQ1 1323 aa17.5■□□□□ 0.39
USP11-207ENST00000478596 ACLYP53396 1101 aa17.5■□□□□ 0.39
USP11-207ENST00000478596 ZYXQ15942 572 aaKnown RBP17.5■□□□□ 0.39
USP11-207ENST00000478596 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
USP11-207ENST00000478596 MOXD2PA6NHM9 499 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
USP11-207ENST00000478596 ADAMTS4O75173 837 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 GH2P01242 217 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
USP11-207ENST00000478596 ACRP10323 421 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 ERCC3P19447 782 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 NHLH1Q02575 133 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 AACSQ86V21 672 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 NEUROD6Q96NK8 337 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 SPATC1LQ9H0A9 340 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 MTCH2Q9Y6C9 303 aa17.49■□□□□ 0.39
USP11-207ENST00000478596 CDK7P50613 346 aa17.48■□□□□ 0.39
USP11-207ENST00000478596 PPP2R2DQ66LE6 453 aa17.48■□□□□ 0.39
USP11-207ENST00000478596 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
USP11-207ENST00000478596 MROH8Q9H579 483 aa17.48■□□□□ 0.39
USP11-207ENST00000478596 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
USP11-207ENST00000478596 IL23AQ9NPF7 189 aa17.48■□□□□ 0.39
USP11-207ENST00000478596 FLT1P17948 1338 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 PLCG2P16885 1265 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 TNNI3KQ59H18 835 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 SMC5Q8IY18 1101 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 LNPKQ9C0E8 428 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 KCNH6Q9H252 994 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 HOXC10Q9NYD6 342 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 FPGT-TNNI3KV9GXZ4 949 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 LRRC37A2A6NM11 1700 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 ELP1O95163 1332 aa17.47■□□□□ 0.39
USP11-207ENST00000478596 CACNA1AO00555 2505 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 A0A1B0GUL7 405 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.39
USP11-207ENST00000478596 AKR1A1P14550 325 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 TIMM10P62072 90 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 COG2Q14746 738 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 CCSAPQ6IQ19 270 aaPredicted RBP17.46■□□□□ 0.39
USP11-207ENST00000478596 TATDN1Q6P1N9 297 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 MAPKAPK5Q8IW41 473 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 KLHDC9Q8NEP7 349 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 HLA-CQ95604 372 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
USP11-207ENST00000478596 RAI14Q9P0K7 980 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 PCDHA11Q9Y5I1 949 aa17.46■□□□□ 0.39
USP11-207ENST00000478596 BAG3O95817 575 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 FGBP02675 491 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 ZNF865P0CJ78 1059 aaPredicted RBP17.45■□□□□ 0.38
USP11-207ENST00000478596 PPP4CP60510 307 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 TBC1D9Q6ZT07 1266 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 MB21D1Q8N884 522 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 ACER1Q8TDN7 264 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 XAGE2Q96GT9 111 aa17.45■□□□□ 0.38
USP11-207ENST00000478596 CD320Q9NPF0 282 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms