RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 SLC9C1Q4G0N8 1177 aa31.51■■■□□ 2.63
CCM2-211ENST00000478582 CYB5R4Q7L1T6 521 aa31.51■■■□□ 2.63
CCM2-211ENST00000478582 MB21D2Q8IYB1 491 aaPredicted RBP31.51■■■□□ 2.63
CCM2-211ENST00000478582 SPICE1Q8N0Z3 855 aa31.51■■■□□ 2.63
CCM2-211ENST00000478582 LRRC47Q8N1G4 583 aaKnown RBP31.51■■■□□ 2.63
CCM2-211ENST00000478582 MYH4Q9Y623 1939 aa31.5■■■□□ 2.63
CCM2-211ENST00000478582 TOP1P11387 765 aaKnown RBP31.5■■■□□ 2.63
CCM2-211ENST00000478582 ZKSCAN1P17029 563 aaPredicted RBP31.5■■■□□ 2.63
CCM2-211ENST00000478582 IRX3P78415 501 aaPredicted RBP31.5■■■□□ 2.63
CCM2-211ENST00000478582 RASEFQ8IZ41 740 aa31.5■■■□□ 2.63
CCM2-211ENST00000478582 TMEM47Q9BQJ4 181 aa31.5■■■□□ 2.63
CCM2-211ENST00000478582 ZKSCAN3Q9BRR0 538 aa31.5■■■□□ 2.63
CCM2-211ENST00000478582 HTTP42858 3142 aa31.5■■■□□ 2.63
CCM2-211ENST00000478582 NDUFB10O96000 172 aa31.49■■■□□ 2.63
CCM2-211ENST00000478582 P2RX7Q99572 595 aaKnown RBP31.49■■■□□ 2.63
CCM2-211ENST00000478582 KRT32Q14532 448 aa31.48■■■□□ 2.63
CCM2-211ENST00000478582 ZNF333Q96JL9 665 aa31.48■■■□□ 2.63
CCM2-211ENST00000478582 UBAC1Q9BSL1 405 aa31.48■■■□□ 2.63
CCM2-211ENST00000478582 MTA3Q9BTC8 594 aa31.48■■■□□ 2.63
CCM2-211ENST00000478582 MYPNQ86TC9 1320 aa31.48■■■□□ 2.63
CCM2-211ENST00000478582 SLFN13Q68D06 897 aa31.47■■■□□ 2.63
CCM2-211ENST00000478582 ENAHQ8N8S7 591 aaPredicted RBP31.47■■■□□ 2.63
CCM2-211ENST00000478582 TNKSO95271 1327 aa31.47■■■□□ 2.63
CCM2-211ENST00000478582 HERVK_113P62684 666 aa31.46■■■□□ 2.63
CCM2-211ENST00000478582 COG2Q14746 738 aa31.46■■■□□ 2.63
CCM2-211ENST00000478582 SEC23AQ15436 765 aa31.46■■■□□ 2.63
CCM2-211ENST00000478582 C8orf34Q49A92 452 aa31.46■■■□□ 2.63
CCM2-211ENST00000478582 RAET1EQ8TD07 263 aa31.46■■■□□ 2.63
CCM2-211ENST00000478582 GTF3C2Q8WUA4 911 aaPredicted RBP31.46■■■□□ 2.63
CCM2-211ENST00000478582 GMCL1Q96IK5 515 aa31.46■■■□□ 2.63
CCM2-211ENST00000478582 RAD21O60216 631 aa31.45■■■□□ 2.63
CCM2-211ENST00000478582 ANTXR2P58335 489 aa31.45■■■□□ 2.63
CCM2-211ENST00000478582 FAM83BQ5T0W9 1011 aa31.45■■■□□ 2.63
CCM2-211ENST00000478582 LBX2Q6XYB7 198 aa31.45■■■□□ 2.63
CCM2-211ENST00000478582 TANGO6Q9C0B7 1094 aa31.45■■■□□ 2.63
CCM2-211ENST00000478582 HOXC10Q9NYD6 342 aa31.45■■■□□ 2.63
CCM2-211ENST00000478582 MORF4L1Q9UBU8 362 aa31.45■■■□□ 2.63
CCM2-211ENST00000478582 TNPO2O14787 897 aaKnown RBP31.44■■■□□ 2.62
CCM2-211ENST00000478582 MCM5P33992 734 aa31.44■■■□□ 2.62
CCM2-211ENST00000478582 PRKCZQ05513 592 aa31.44■■■□□ 2.62
CCM2-211ENST00000478582 SH3TC2Q8TF17 1288 aa31.44■■■□□ 2.62
CCM2-211ENST00000478582 NEK1Q96PY6 1258 aa31.44■■■□□ 2.62
CCM2-211ENST00000478582 SNX14Q9Y5W7 946 aa31.44■■■□□ 2.62
CCM2-211ENST00000478582 SART3Q15020 963 aaKnown RBP31.43■■■□□ 2.62
CCM2-211ENST00000478582 GABRQQ9UN88 632 aa31.43■■■□□ 2.62
CCM2-211ENST00000478582 IFIT3O14879 490 aaKnown RBP31.42■■■□□ 2.62
CCM2-211ENST00000478582 BMP3P12645 472 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 MCCP23508 829 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 DSG3P32926 999 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 ADCK5Q3MIX3 580 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 IGDCC4Q8TDY8 1250 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 DCAF4Q8WV16 495 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 NUP88Q99567 741 aaPredicted RBP31.42■■■□□ 2.62
CCM2-211ENST00000478582 TMEM106CQ9BVX2 250 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 KAT14Q9H8E8 782 aa31.42■■■□□ 2.62
CCM2-211ENST00000478582 ERICH2A1L162 156 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 POTEFA5A3E0 1075 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 SPDYE16A6NNV3 312 aaPredicted RBP31.41■■■□□ 2.62
CCM2-211ENST00000478582 FLOT1O75955 427 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 GRK4P32298 578 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 SLC1A4P43007 532 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 IFIT1BQ5T764 474 aaKnown RBP31.41■■■□□ 2.62
CCM2-211ENST00000478582 POTEEQ6S8J3 1075 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 CHST3Q7LGC8 479 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 COA7Q96BR5 231 aa31.41■■■□□ 2.62
CCM2-211ENST00000478582 PRC1O43663 620 aa31.4■■■□□ 2.62
CCM2-211ENST00000478582 HMGB1P09429 215 aaKnown RBP31.4■■■□□ 2.62
CCM2-211ENST00000478582 FLT3LGP49771 235 aa31.4■■■□□ 2.62
CCM2-211ENST00000478582 COL9A3Q14050 684 aaPredicted RBP31.4■■■□□ 2.62
CCM2-211ENST00000478582 PNMA1Q8ND90 353 aa31.4■■■□□ 2.62
CCM2-211ENST00000478582 TMEM87BQ96K49 555 aa31.4■■■□□ 2.62
CCM2-211ENST00000478582 RBPJLQ9UBG7 517 aa31.4■■■□□ 2.62
CCM2-211ENST00000478582 ADAMTS5Q9UNA0 930 aa31.4■■■□□ 2.62
CCM2-211ENST00000478582 WDR19Q8NEZ3 1342 aa31.4■■■□□ 2.62
CCM2-211ENST00000478582 DOCK3Q8IZD9 2030 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 PLA2G6O60733 806 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 SEC24BO95487 1268 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 SNHG28P0DPA3 235 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 GPRC5AQ8NFJ5 357 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 FEM1BQ9UK73 627 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 RABGAP1Q9Y3P9 1069 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 RLFQ13129 1914 aa31.39■■■□□ 2.62
CCM2-211ENST00000478582 RBBP6Q7Z6E9 1792 aaKnown RBP31.38■■■□□ 2.61
CCM2-211ENST00000478582 PDHBP11177 359 aa31.38■■■□□ 2.61
CCM2-211ENST00000478582 EXOSC10Q01780 885 aaKnown RBP31.38■■■□□ 2.61
CCM2-211ENST00000478582 IRF5Q13568 498 aa31.38■■■□□ 2.61
CCM2-211ENST00000478582 WTAPQ15007 396 aa31.38■■■□□ 2.61
CCM2-211ENST00000478582 TMEM67Q5HYA8 995 aa31.38■■■□□ 2.61
CCM2-211ENST00000478582 DHX32Q7L7V1 743 aaKnown RBP31.38■■■□□ 2.61
CCM2-211ENST00000478582 TXNRD2Q9NNW7 524 aa31.38■■■□□ 2.61
CCM2-211ENST00000478582 FBXO28Q9NVF7 368 aa31.38■■■□□ 2.61
CCM2-211ENST00000478582 PPP1R9AQ9ULJ8 1098 aa31.38■■■□□ 2.61
CCM2-211ENST00000478582 KIAA0100Q14667 2235 aaKnown RBP31.38■■■□□ 2.61
CCM2-211ENST00000478582 MB21D1Q8N884 522 aa31.37■■■□□ 2.61
CCM2-211ENST00000478582 SLF1Q9BQI6 1058 aa31.37■■■□□ 2.61
CCM2-211ENST00000478582 CENPFP49454 3210 aa31.37■■■□□ 2.61
CCM2-211ENST00000478582 PSMA5P28066 241 aa31.36■■■□□ 2.61
CCM2-211ENST00000478582 FAM160B2Q86V87 743 aa31.36■■■□□ 2.61
CCM2-211ENST00000478582 TMTC2Q8N394 836 aa31.36■■■□□ 2.61
CCM2-211ENST00000478582 PRPF38AQ8NAV1 312 aaKnown RBP31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms