RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.74□□□□□ -0.37
GFM1-207ENST00000478254 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 ZSWIM5Q9P217 1185 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 FAM184BQ9ULE4 1060 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 CHD1O14646 1710 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 CCDC196A0A1B0GTZ2 297 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 PLEKP08567 350 aaPredicted RBP12.74□□□□□ -0.37
GFM1-207ENST00000478254 EZRP15311 586 aaKnown RBP12.74□□□□□ -0.37
GFM1-207ENST00000478254 TUBB2AQ13885 445 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 NEDD9Q14511 834 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 MFSD6Q6ZSS7 791 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 IQCA1Q86XH1 822 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 TUBB2BQ9BVA1 445 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 TRIM31Q9BZY9 425 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 KLC4Q9NSK0 619 aa12.74□□□□□ -0.37
GFM1-207ENST00000478254 TACC1O75410 805 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 ERCC5P28715 1186 aaPredicted RBP12.73□□□□□ -0.37
GFM1-207ENST00000478254 RFX5P48382 616 aaPredicted RBP12.73□□□□□ -0.37
GFM1-207ENST00000478254 NAIF1Q69YI7 327 aaPredicted RBP12.73□□□□□ -0.37
GFM1-207ENST00000478254 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 BABAM1Q9NWV8 329 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 TLDC2A0PJX2 215 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 RCCD1A6NED2 376 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 PRKAB2O43741 272 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
GFM1-207ENST00000478254 RPS6KA5O75582 802 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 XBP1P17861 261 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 CABP4P57796 275 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 PIK3AP1Q6ZUJ8 805 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 CPLX4Q7Z7G2 160 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 SYNE4Q8N205 404 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 WASF1Q92558 559 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
GFM1-207ENST00000478254 ABCF2Q9UG63 623 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
GFM1-207ENST00000478254 LMTK2Q8IWU2 1503 aa12.73□□□□□ -0.37
GFM1-207ENST00000478254 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 PARP1P09874 1014 aaKnown RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 MYBL1P10243 752 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 ELF1P32519 619 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 TCP11Q8WWU5 503 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 ZIM3Q96PE6 472 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 DONSONQ9NYP3 566 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 ACTN4O43707 911 aaKnown RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 MBD4O95243 580 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 MMP1P03956 469 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 CLTAP09496 248 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 TMOD1P28289 359 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 GCKP35557 465 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 STAT6P42226 847 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 TUBB4BP68371 445 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 PTGDRQ13258 359 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 WDR93Q6P2C0 686 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 IP6K1Q92551 441 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 THOC1Q96FV9 657 aaKnown RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 UIMC1Q96RL1 719 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 NHEJ1Q9H9Q4 299 aaPredicted RBP12.72□□□□□ -0.37
GFM1-207ENST00000478254 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 OVOS2A0A0J9YW53 1432 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 OVOS2Q6IE36 1432 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 PDIA6Q15084 440 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 TCP11X2Q5H9J9 407 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 TRAPPC11Q7Z392 1133 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 GGT7Q9UJ14 662 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 AGLP35573 1532 aa12.72□□□□□ -0.37
GFM1-207ENST00000478254 GOLGA8KD6RF30 607 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 NLRP5P59047 1200 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 BIRC2Q13490 618 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 PPP1R7Q15435 360 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 AMOTQ4VCS5 1084 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 ATG9AQ7Z3C6 839 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 UHMK1Q8TAS1 419 aaKnown RBP12.71□□□□□ -0.37
GFM1-207ENST00000478254 UBLCP1Q8WVY7 318 aaPredicted RBP12.71□□□□□ -0.37
GFM1-207ENST00000478254 GOPCQ9HD26 462 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
GFM1-207ENST00000478254 CHUKO15111 745 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 KIF4AO95239 1232 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 FTCDO95954 541 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
GFM1-207ENST00000478254 CARSP49589 748 aaKnown RBP12.71□□□□□ -0.37
GFM1-207ENST00000478254 TTMPQ5BVD1 217 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 CNPY4Q8N129 248 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 KRT12Q99456 494 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 NLRC4Q9NPP4 1024 aa12.71□□□□□ -0.37
GFM1-207ENST00000478254 PALLDQ8WX93 1383 aa12.71□□□□□ -0.38
GFM1-207ENST00000478254 MYO5BQ9ULV0 1848 aa12.71□□□□□ -0.38
GFM1-207ENST00000478254 NR1D1P20393 614 aa12.71□□□□□ -0.38
GFM1-207ENST00000478254 LSP1P33241 339 aa12.71□□□□□ -0.38
GFM1-207ENST00000478254 HERVK_113P62684 666 aa12.71□□□□□ -0.38
GFM1-207ENST00000478254 MSL1Q68DK7 614 aa12.71□□□□□ -0.38
GFM1-207ENST00000478254 CACNA2D4Q7Z3S7 1137 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms