RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 WDHD1O75717 1129 aaPredicted RBP4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 STK10O94804 968 aaKnown RBP4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 EOMESO95936 686 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 COL6A1P12109 1028 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 IMPDH2P12268 514 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 POLD1P28340 1107 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 CD97P48960 835 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 CLCQ05315 142 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 LRRFIP1Q32MZ4 808 aaKnown RBP4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 HSP90AB3PQ58FF7 597 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 RASGRP4Q8TDF6 673 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 CYB5D2Q8WUJ1 264 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 LNPKQ9C0E8 428 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 ACBD3Q9H3P7 528 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 MKNK2Q9HBH9 465 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 PRDM5Q9NQX1 630 aaPredicted RBP4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 GEMIN8Q9NWZ8 242 aaKnown RBP4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 PPP1R1BQ9UD71 204 aaPredicted RBP4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 ABCF2Q9UG63 623 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 MAPK8IP1Q9UQF2 711 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 SCINQ9Y6U3 715 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 SYNRGQ9UMZ2 1314 aa4.39□□□□□ -1.71
FNDC3B-209ENST00000478016 SCO2A0A1W2PP80 73 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 SLC22A31A6NKX4 558 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 UPK3BL1B0FP48 263 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 CHURC1-FNTBB4DL54 471 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 UPK3BL2E5RIL1 263 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 IGF2BP3O00425 579 aaKnown RBP eCLIP4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 CBFA2T2O43439 604 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 DNAJA2O60884 412 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 VIL1P09327 827 aaKnown RBP4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 CYP7A1P22680 504 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 HOXA10P31260 410 aaPredicted RBP4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 SSTR4P31391 388 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 MAN1A1P33908 653 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 PEX19P40855 299 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 ETV3P41162 512 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 TBX4P57082 545 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 EVA1CP58658 441 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 GNL2Q13823 731 aaKnown RBP4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 LRP8Q14114 963 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 MSMPQ1L6U9 139 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 ARHGAP27Q6ZUM4 889 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 FAM214BQ7L5A3 538 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 GET4Q7L5D6 327 aaPredicted RBP4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 CCDC146Q8IYE0 955 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 FAM181AQ8N9Y4 354 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 COX4I2Q96KJ9 171 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 HEXIM2Q96MH2 286 aaKnown RBP4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 FERD3LQ96RJ6 166 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 ZNRF3Q9ULT6 936 aa4.38□□□□□ -1.71
FNDC3B-209ENST00000478016 SMARCA4P51532 1647 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 MEIS3P2A8K0S8 358 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 GNAT3A8MTJ3 354 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 KIAA1324LA8MWY0 1029 aaPredicted RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 MED26O95402 600 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 IBSPP21815 317 aaPredicted RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 ANP32AP39687 249 aaKnown RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 SOX9P48436 509 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 OXCT1P55809 520 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 IRX3P78415 501 aaPredicted RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 PLEKHG6Q3KR16 790 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 GJC2Q5T442 439 aaPredicted RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 SFRP5Q5T4F7 317 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 EFCAB2Q5VUJ9 269 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 CDCP2Q5VXM1 449 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 OVOS1Q6IE37 1185 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 PHACTR4Q8IZ21 702 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 NLGN1Q8N2Q7 840 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 DNAJB8Q8NHS0 232 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 RIN3Q8TB24 985 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 ZCRB1Q8TBF4 217 aaKnown RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 NETO1Q8TDF5 533 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 TMEM40Q8WWA1 233 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 ARMC5Q96C12 935 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 CCDC74BQ96LY2 380 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 ZNF830Q96NB3 372 aaPredicted RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 PCGF6Q9BYE7 350 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 INO80BQ9C086 356 aaPredicted RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 GINM1Q9NU53 330 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 PCMTD2Q9NV79 361 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 GABBR1Q9UBS5 961 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 ZC3H7BQ9UGR2 993 aaKnown RBP4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 PPT2Q9UMR5 302 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 CEP131Q9UPN4 1083 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 EFR3BQ9Y2G0 817 aa4.37□□□□□ -1.71
FNDC3B-209ENST00000478016 RGS13O14921 159 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 CEACAM5P06731 702 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 RAG1P15918 1043 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 ITIH2P19823 946 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 SPINK2P20155 84 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 TNNI2P48788 182 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 ARTNQ5T4W7 220 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 NBPF6Q5VWK0 638 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 FBXW10Q5XX13 1052 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 NLRC3Q7RTR2 1065 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 CDH24Q86UP0 819 aa4.36□□□□□ -1.71
FNDC3B-209ENST00000478016 NBPF5PQ86XG9 351 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms