RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 CBLL1Q75N03 491 aa7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 SYTL5Q8TDW5 730 aaPredicted RBP7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 UBXN4Q92575 508 aa7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 ARMC5Q96C12 935 aa7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 MKRN2Q9H000 416 aaKnown RBP7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 PHAXQ9H814 394 aaKnown RBP7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 ADGRE2Q9UHX3 823 aa7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 ZNF214Q9UL59 606 aaPredicted RBP7.14□□□□□ -1.27
SMNDC1-205ENST00000477763 ESR1P03372 595 aa7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 GTF2F1P35269 517 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 AUHQ13825 339 aaKnown RBP7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 MCF2L2Q86YR7 1114 aa7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 DAGLBQ8NCG7 672 aa7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 PI4K2BQ8TCG2 481 aa7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 ZNF512BQ96KM6 892 aaPredicted RBP7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 PCDHB12Q9Y5F1 795 aa7.13□□□□□ -1.27
SMNDC1-205ENST00000477763 LTBP3Q9NS15 1303 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 SHISA3A0PJX4 238 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 FAM86C2PA6NEL3 165 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 BTBD11A6QL63 1104 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 C9IYK1 514 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 STK10O94804 968 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 CLEC16AQ2KHT3 1053 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 ZNF792Q3KQV3 632 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 PPFIBP1Q86W92 1011 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 CCDC144CPQ8IYA2 1237 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 C7orf61Q8IZ16 206 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 ZNF655Q8N720 491 aaPredicted RBP7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 FAM169BQ8N8A8 192 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 HDAC8Q9BY41 377 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 PRDM14Q9GZV8 571 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 CARS2Q9HA77 564 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 MBNL3Q9NUK0 354 aaKnown RBP7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 DUSP13Q9UII6 198 aa7.12□□□□□ -1.27
SMNDC1-205ENST00000477763 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 SIGLEC6O43699 453 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 IGSF3O75054 1194 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 SOGA3Q5TF21 947 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 CREG2Q8IUH2 290 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 CCDC120Q96HB5 630 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 HIRIP3Q9BW71 556 aaPredicted RBP7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 PRKAG3Q9UGI9 489 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 ADAMTS6Q9UKP5 1117 aa7.11□□□□□ -1.27
SMNDC1-205ENST00000477763 WASH4PA8MWX3 477 aa7.1□□□□□ -1.27
SMNDC1-205ENST00000477763 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-205ENST00000477763 TXKP42681 527 aa7.1□□□□□ -1.27
SMNDC1-205ENST00000477763 SNW1Q13573 536 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-205ENST00000477763 PPP2R5EQ16537 467 aa7.1□□□□□ -1.27
SMNDC1-205ENST00000477763 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
SMNDC1-205ENST00000477763 DHX38Q92620 1227 aaKnown RBP7.1□□□□□ -1.27
SMNDC1-205ENST00000477763 SHOXO15266 292 aa7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 PRAMEF1O95521 474 aa7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 SLC7A5Q01650 507 aa7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 AXDND1Q5T1B0 1012 aaPredicted RBP7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 TDRD10Q5VZ19 366 aaKnown RBP7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 ALPK1Q96QP1 1244 aa7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 CHST7Q9NS84 486 aa7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 FBXL21Q9UKT6 434 aa7.09□□□□□ -1.27
SMNDC1-205ENST00000477763 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 SMAD7O15105 426 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 LTKP29376 864 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 EGR3Q06889 387 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 RBL2Q08999 1139 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 GNPTABQ3T906 1256 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 RNF111Q6ZNA4 994 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 LRRN4CLQ8ND94 238 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 TCTN2Q96GX1 697 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 ZNF408Q9H9D4 720 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 RC3H2Q9HBD1 1191 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 R3HCC1Q9Y3T6 440 aaKnown RBP7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 PCDHA11Q9Y5I1 949 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 MRVI1Q9Y6F6 885 aa7.08□□□□□ -1.28
SMNDC1-205ENST00000477763 A0A087WZG4 1122 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 TP53P04637 393 aaPredicted RBP7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 ITGB5P18084 799 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 ETFBP38117 255 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 GDNFP39905 211 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 TCEAL1Q15170 157 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 DCAF15Q66K64 600 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 ATG4DQ86TL0 474 aaPredicted RBP7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 CKAP2LQ8IYA6 745 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 LINC00116Q8NCU8 138 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 FLAD1Q8NFF5 587 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 KLHL6Q8WZ60 621 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 HAUS7Q99871 368 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 GP6Q9HCN6 339 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 PRDM7Q9NQW5 492 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 GFOD1Q9NXC2 390 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 ACTR10Q9NZ32 417 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 ZNF281Q9Y2X9 895 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 FHOD1Q9Y613 1164 aa7.07□□□□□ -1.28
SMNDC1-205ENST00000477763 BIN1O00499 593 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 CBFA2T2O43439 604 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 JUNBP17275 347 aaPredicted RBP7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 CD247P20963 164 aa7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 PCBP3P57721 371 aaKnown RBP7.06□□□□□ -1.28
SMNDC1-205ENST00000477763 TEKQ02763 1124 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms