RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ANKRD20A12PQ8NF67 263 aa20.48■□□□□ 0.87
CCM2-209ENST00000477605 SH3GLB2Q9NR46 395 aa20.48■□□□□ 0.87
CCM2-209ENST00000477605 MINPP1Q9UNW1 487 aa20.48■□□□□ 0.87
CCM2-209ENST00000477605 TTF2Q9UNY4 1162 aaKnown RBP20.48■□□□□ 0.87
CCM2-209ENST00000477605 CACNA1SQ13698 1873 aa20.48■□□□□ 0.87
CCM2-209ENST00000477605 USP17L12C9JPN9 530 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 USP17L21D6R901 530 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 KIF5BP33176 963 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 PLA2G4AP47712 749 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 PFKFB3Q16875 520 aaPredicted RBP20.47■□□□□ 0.87
CCM2-209ENST00000477605 SLC10A5Q5PT55 438 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 SRBD1Q8N5C6 995 aaKnown RBP20.47■□□□□ 0.87
CCM2-209ENST00000477605 MRPL44Q9H9J2 332 aaKnown RBP20.47■□□□□ 0.87
CCM2-209ENST00000477605 APBA3O96018 575 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 LONP1P36776 959 aaKnown RBP20.47■□□□□ 0.87
CCM2-209ENST00000477605 NLRP5P59047 1200 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 PDXDC2PQ6P474 469 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 CCDC12Q8WUD4 166 aaPredicted RBP20.47■□□□□ 0.87
CCM2-209ENST00000477605 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
CCM2-209ENST00000477605 ARPP21Q9UBL0 812 aaPredicted RBP20.47■□□□□ 0.87
CCM2-209ENST00000477605 DLEC1Q9Y238 1755 aa20.47■□□□□ 0.87
CCM2-209ENST00000477605 SOWAHDA6NJG2 315 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 POTEB2H3BUK9 544 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 STX17P56962 302 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 RAD9BQ6WBX8 426 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 CEP112Q8N8E3 955 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 DESI2Q9BSY9 194 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 UBXN6Q9BZV1 441 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 XDHP47989 1333 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 CYP2D7A0A087X1C5 515 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 ZNF658Q5TYW1 1059 aaPredicted RBP20.46■□□□□ 0.87
CCM2-209ENST00000477605 CC2D1AQ6P1N0 951 aaPredicted RBP20.46■□□□□ 0.87
CCM2-209ENST00000477605 ZNF384Q8TF68 577 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 MYO1AQ9UBC5 1043 aa20.46■□□□□ 0.87
CCM2-209ENST00000477605 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 WNT7AO00755 349 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 TXLNAP40222 546 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 BRD3Q15059 726 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 EZH2Q15910 746 aaKnown RBP20.45■□□□□ 0.86
CCM2-209ENST00000477605 ERFEQ4G0M1 354 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 SRGAP1Q7Z6B7 1085 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 CAMKK2Q96RR4 588 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 ARFGAP3Q9NP61 516 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 DCP1AQ9NPI6 582 aaPredicted RBP20.45■□□□□ 0.86
CCM2-209ENST00000477605 SBF2Q86WG5 1849 aa20.45■□□□□ 0.86
CCM2-209ENST00000477605 hCG_1642624A0A1W2PR95 340 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 SMIM22K7EJ46 135 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 PAK1Q13153 545 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 MTF1Q14872 753 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 KARSQ15046 597 aaKnown RBP20.44■□□□□ 0.86
CCM2-209ENST00000477605 TEX35Q5T0J7 233 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 RRAGBQ5VZM2 374 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 CDC23Q9UJX2 597 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 CTNND2Q9UQB3 1225 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 GYPCP04921 128 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 CASP14P31944 242 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 CCDC178Q5BJE1 867 aa20.44■□□□□ 0.86
CCM2-209ENST00000477605 CCDC151A5D8V7 595 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 N4BP3O15049 544 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 MYL1P05976 194 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 MECOMQ03112 1051 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 KRT31Q15323 416 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 PIK3AP1Q6ZUJ8 805 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 PARD6BQ9BYG5 372 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 ANKRD2Q9GZV1 360 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 MYH6P13533 1939 aa20.43■□□□□ 0.86
CCM2-209ENST00000477605 H7C1D1 291 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 CASP1P29466 404 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 COPB1P53618 953 aaKnown RBP20.42■□□□□ 0.86
CCM2-209ENST00000477605 CYP26C1Q6V0L0 522 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 DGKHQ86XP1 1220 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 RPN1P04843 607 aaKnown RBP20.42■□□□□ 0.86
CCM2-209ENST00000477605 GTF2E1P29083 439 aaPredicted RBP20.42■□□□□ 0.86
CCM2-209ENST00000477605 GNAQP50148 359 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 TCP11X2Q5H9J9 407 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 GALNT17Q6IS24 598 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 PTF1AQ7RTS3 328 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 SMYD4Q8IYR2 804 aaPredicted RBP20.42■□□□□ 0.86
CCM2-209ENST00000477605 C4orf32Q8N8J7 132 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 CPLX3Q8WVH0 158 aa20.42■□□□□ 0.86
CCM2-209ENST00000477605 HNRNPLLQ8WVV9 542 aaKnown RBP20.42■□□□□ 0.86
CCM2-209ENST00000477605 TUBBP07437 444 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 CHMP4BP1P59074 171 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 NOM1Q5C9Z4 860 aaKnown RBP20.41■□□□□ 0.86
CCM2-209ENST00000477605 BLIDQ8IZY5 108 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 LZTFL1Q9NQ48 299 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 CTAGE9A4FU28 777 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 HIBADHP31937 336 aaKnown RBP20.41■□□□□ 0.86
CCM2-209ENST00000477605 MCM7P33993 719 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 FXR1P51114 621 aaKnown RBP eCLIP20.41■□□□□ 0.86
CCM2-209ENST00000477605 IL17AQ16552 155 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 NELFBQ8WX92 580 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 ACSBG1Q96GR2 724 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 ABHD10Q9NUJ1 306 aa20.41■□□□□ 0.86
CCM2-209ENST00000477605 CYP2C19P33261 490 aa20.4■□□□□ 0.86
CCM2-209ENST00000477605 KCNB1Q14721 858 aa20.4■□□□□ 0.86
CCM2-209ENST00000477605 SPTY2D1Q68D10 685 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms