RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 GPAT2Q6NUI2 795 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 TMTC2Q8N394 836 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 LPAR1Q92633 364 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 PDRG1Q9NUG6 133 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 MTMR7Q9Y216 660 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 FGD1P98174 961 aa19.67■□□□□ 0.74
EPHB4-204ENST00000477446 SLFN13Q68D06 897 aa19.67■□□□□ 0.74
EPHB4-204ENST00000477446 RASGRP2Q7LDG7 609 aa19.67■□□□□ 0.74
EPHB4-204ENST00000477446 FBXL16Q8N461 479 aa19.67■□□□□ 0.74
EPHB4-204ENST00000477446 CHMP4CQ96CF2 233 aa19.67■□□□□ 0.74
EPHB4-204ENST00000477446 AGTPBP1Q9UPW5 1226 aa19.67■□□□□ 0.74
EPHB4-204ENST00000477446 BTBD19C9JJ37 291 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 IGF2BP3O00425 579 aaKnown RBP eCLIP19.66■□□□□ 0.74
EPHB4-204ENST00000477446 NFXL1Q6ZNB6 911 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 SGMS1Q86VZ5 419 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 FAM43AQ8N2R8 423 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 AGXT2Q9BYV1 514 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 CCDC69A6NI79 296 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 ANKRD23Q86SG2 305 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 IFNL1Q8IU54 200 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 REM2Q8IYK8 340 aaPredicted RBP19.66■□□□□ 0.74
EPHB4-204ENST00000477446 BRF1Q92994 677 aa19.66■□□□□ 0.74
EPHB4-204ENST00000477446 NUP88Q99567 741 aaPredicted RBP19.66■□□□□ 0.74
EPHB4-204ENST00000477446 WDR46O15213 610 aaKnown RBP19.65■□□□□ 0.74
EPHB4-204ENST00000477446 PDHBP11177 359 aa19.65■□□□□ 0.74
EPHB4-204ENST00000477446 TOB2Q14106 344 aaPredicted RBP19.65■□□□□ 0.74
EPHB4-204ENST00000477446 FAM83BQ5T0W9 1011 aa19.65■□□□□ 0.74
EPHB4-204ENST00000477446 ZNF654Q8IZM8 581 aa19.65■□□□□ 0.74
EPHB4-204ENST00000477446 GMCL1Q96IK5 515 aa19.65■□□□□ 0.74
EPHB4-204ENST00000477446 ZSCAN31Q96LW9 406 aaPredicted RBP19.65■□□□□ 0.74
EPHB4-204ENST00000477446 RPAP3Q9H6T3 665 aaPredicted RBP19.65■□□□□ 0.74
EPHB4-204ENST00000477446 BRPF3Q9ULD4 1205 aa19.65■□□□□ 0.74
EPHB4-204ENST00000477446 LIMCH1Q9UPQ0 1083 aa19.65■□□□□ 0.74
EPHB4-204ENST00000477446 CEP350Q5VT06 3117 aa19.65■□□□□ 0.74
EPHB4-204ENST00000477446 PDHXO00330 501 aa19.64■□□□□ 0.73
EPHB4-204ENST00000477446 SNHG28P0DPA3 235 aa19.64■□□□□ 0.73
EPHB4-204ENST00000477446 HOXA7P31268 230 aaPredicted RBP19.64■□□□□ 0.73
EPHB4-204ENST00000477446 SLC1A4P43007 532 aa19.64■□□□□ 0.73
EPHB4-204ENST00000477446 TROAPQ12815 778 aa19.64■□□□□ 0.73
EPHB4-204ENST00000477446 CATIPQ7Z7H3 387 aa19.64■□□□□ 0.73
EPHB4-204ENST00000477446 ALDH8A1Q9H2A2 487 aaPredicted RBP19.64■□□□□ 0.73
EPHB4-204ENST00000477446 BAG4O95429 457 aaKnown RBP19.63■□□□□ 0.73
EPHB4-204ENST00000477446 BMP3P12645 472 aa19.63■□□□□ 0.73
EPHB4-204ENST00000477446 APOBRQ0VD83 1088 aa19.63■□□□□ 0.73
EPHB4-204ENST00000477446 CATSPERGQ6ZRH7 1159 aa19.63■□□□□ 0.73
EPHB4-204ENST00000477446 DCAF4Q8WV16 495 aa19.63■□□□□ 0.73
EPHB4-204ENST00000477446 MYL10Q9BUA6 226 aa19.63■□□□□ 0.73
EPHB4-204ENST00000477446 SLC12A7Q9Y666 1083 aa19.63■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L15C9J2P7 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L13C9JLJ4 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L11C9JVI0 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L18D6R9N7 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L22D6RA61 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L17D6RBQ6 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L19D6RCP7 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L20D6RJB6 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 USP17L24Q0WX57 530 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 OTUD7BQ6GQQ9 843 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 APOA5Q6Q788 366 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 KCTD1Q719H9 257 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 LARP6Q9BRS8 491 aaKnown RBP19.62■□□□□ 0.73
EPHB4-204ENST00000477446 TANGO6Q9C0B7 1094 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 SLC45A1Q9Y2W3 748 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 PARP14Q460N5 1801 aa19.62■□□□□ 0.73
EPHB4-204ENST00000477446 KLF18A0A0U1RQI7 1052 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 DDAH1O94760 285 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 AK2P54819 239 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 PABPC4Q13310 644 aaKnown RBP eCLIP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 CCDC96Q2M329 555 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 RAB11FIP4Q86YS3 637 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 NUP133Q8WUM0 1156 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 ASCC2Q9H1I8 757 aaPredicted RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 ZCCHC17Q9NP64 241 aaKnown RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 SH2B1Q9NRF2 756 aaPredicted RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 ISY1Q9ULR0 285 aaKnown RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 FRMPD2Q68DX3 1309 aaPredicted RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 RLFQ13129 1914 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 GOLGA8HP0CJ92 632 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 PDIA4P13667 645 aaKnown RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 RXRAP19793 462 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 EVCP57679 992 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 ZNF543Q08ER8 600 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 L1TD1Q5T7N2 865 aaKnown RBP19.61■□□□□ 0.73
EPHB4-204ENST00000477446 SYNE3Q6ZMZ3 975 aa19.61■□□□□ 0.73
EPHB4-204ENST00000477446 PCNTO95613 3336 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 TMEM232C9JQI7 657 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 FLOT1O75955 427 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 PARP1P09874 1014 aaKnown RBP19.6■□□□□ 0.73
EPHB4-204ENST00000477446 CYP2C8P10632 490 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 OSBPP22059 807 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 IRX3P78415 501 aaPredicted RBP19.6■□□□□ 0.73
EPHB4-204ENST00000477446 GRM4Q14833 912 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 ANKRD1Q15327 319 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 GPCPD1Q9NPB8 672 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 FBXO28Q9NVF7 368 aa19.6■□□□□ 0.73
EPHB4-204ENST00000477446 NAP1L2Q9ULW6 460 aaPredicted RBP19.6■□□□□ 0.73
EPHB4-204ENST00000477446 ZBTB43O43298 467 aa19.59■□□□□ 0.73
EPHB4-204ENST00000477446 ALDH1A1P00352 501 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms