RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 IARSP41252 1262 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 LIG3P49916 1009 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 E2F4Q16254 413 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 PAPD7Q5XG87 772 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 PRPF38AQ8NAV1 312 aaKnown RBP17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 ATRIPQ8WXE1 791 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 CAPS2Q9BXY5 557 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 PLEKHA4Q9H4M7 779 aa17.16■□□□□ 0.34
CLSTN1-205ENST00000477264 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 ANKRD65E5RJM6 399 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 SH2B2O14492 632 aaPredicted RBP17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 RGL2O15211 777 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 ERVK-24P63145 666 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 APPBP2Q92624 585 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 KAT14Q9H8E8 782 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 NARFQ9UHQ1 456 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 FOXP2O15409 715 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 OPA1O60313 960 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 FGAP02671 866 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 GGCXP38435 758 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 FXR1P51114 621 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 DDR1Q08345 913 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 APOA5Q6Q788 366 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 SELENOOQ9BVL4 669 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 LRRC4BQ9NT99 713 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 LIMA1Q9UHB6 759 aaKnown RBP17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 SRPRBQ9Y5M8 271 aaKnown RBP17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 SAR1BQ9Y6B6 198 aa17.15■□□□□ 0.34
CLSTN1-205ENST00000477264 ANO9A1A5B4 782 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 PDE8AO60658 829 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 CIAO1O76071 339 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 HAND2P61296 217 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 AMOTL1Q8IY63 956 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 CPLX3Q8WVH0 158 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 SECISBP2LQ93073 1101 aaKnown RBP17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 CABS1Q96KC9 395 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 GSDMAQ96QA5 445 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 FAM184BQ9ULE4 1060 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 SCN7AQ01118 1682 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 MYH6P13533 1939 aa17.14■□□□□ 0.33
CLSTN1-205ENST00000477264 CSF1RP07333 972 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 SKOR1P84550 965 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 IFIT5Q13325 482 aaKnown RBP17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 KCNV1Q6PIU1 500 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 PAGR1Q9BTK6 254 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 FOXP1Q9H334 677 aaPredicted RBP17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 GRIN2DO15399 1336 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 ZEB2O60315 1214 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 FSBPO95073 299 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 EPB41P11171 864 aaKnown RBP17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 RFC4P35249 363 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 CTSWP56202 376 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 MICALCLQ6ZW33 695 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 BCAS4Q8TDM0 211 aa17.13■□□□□ 0.33
CLSTN1-205ENST00000477264 TIAM2Q8IVF5 1701 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 AGPSO00116 658 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 ZBTB43O43298 467 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 KIAA0754O94854 1291 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 CLSTN1O94985 981 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 CCNI2Q6ZMN8 369 aaPredicted RBP17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 ARHGEF1Q92888 912 aaKnown RBP17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 SH3GL2Q99962 352 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 NDUFA10O95299 355 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 MMP1P03956 469 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 ITIH3Q06033 890 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 NTRK3Q16288 839 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 WASHC4Q2M389 1173 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 SGMS1Q86VZ5 419 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 AENQ8WTP8 325 aaKnown RBP17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 NUP88Q99567 741 aaPredicted RBP17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 AATFQ9NY61 560 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLSTN1-205ENST00000477264 LRRC10BA6NIK2 292 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 TFRCP02786 760 aaKnown RBP17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 YTHDF3Q7Z739 585 aaKnown RBP17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 EPN1Q9Y6I3 576 aaPredicted RBP17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 C21orf2O43822 256 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 APBA3O96018 575 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 ADRA2BP18089 450 aa17.11■□□□□ 0.33
CLSTN1-205ENST00000477264 GNGT1P63211 74 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms