RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 GJD2Q9UKL4 321 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
CCM2-208ENST00000476594 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
CCM2-208ENST00000476594 F5H6K3 240 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 ORC4O43929 436 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 RANBP6O60518 1105 aaKnown RBP12.09□□□□□ -0.47
CCM2-208ENST00000476594 CNMDO75829 334 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 HSPD1P10809 573 aaKnown RBP12.09□□□□□ -0.47
CCM2-208ENST00000476594 PTPREP23469 700 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 KLRC3Q07444 240 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 MORN1Q5T089 497 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 FAM83BQ5T0W9 1011 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 PRPF38BQ5VTL8 546 aaKnown RBP12.09□□□□□ -0.47
CCM2-208ENST00000476594 MFSD14CQ5VZR4 134 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 NCAPG2Q86XI2 1143 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 GMCL1P1Q8NEA9 526 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 U2AF1L4Q8WU68 220 aaKnown RBP12.09□□□□□ -0.47
CCM2-208ENST00000476594 MKL1Q969V6 931 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 ATG4CQ96DT6 458 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 CEP95Q96GE4 821 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 HTATIP2Q9BUP3 242 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCM2-208ENST00000476594 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 BTBD7Q9P203 1132 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
CCM2-208ENST00000476594 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
CCM2-208ENST00000476594 GREB1LQ9C091 1923 aaPredicted RBP12.08□□□□□ -0.48
CCM2-208ENST00000476594 IGKV6D-41A0A0C4DH26 115 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 ZBED4O75132 1171 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 SGPL1O95470 568 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 FGAP02671 866 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
CCM2-208ENST00000476594 CTDSPL2Q05D32 466 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 GRB14Q14449 540 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 CCDC178Q5BJE1 867 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 CWC27Q6UX04 472 aaKnown RBP12.08□□□□□ -0.48
CCM2-208ENST00000476594 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 ABRAQ8N0Z2 381 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
CCM2-208ENST00000476594 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCM2-208ENST00000476594 MOV10L1Q9BXT6 1211 aaKnown RBP12.08□□□□□ -0.48
CCM2-208ENST00000476594 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCM2-208ENST00000476594 RAD50Q92878 1312 aa12.08□□□□□ -0.48
CCM2-208ENST00000476594 VWA5AO00534 786 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 ZNF213O14771 459 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 MSCO60682 206 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 NDUFB10O96000 172 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 HOXC6P09630 235 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 FCER1AP12319 257 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
CCM2-208ENST00000476594 ERCC3P19447 782 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 STAT3P40763 770 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 IKQ13123 557 aaPredicted RBP12.07□□□□□ -0.48
CCM2-208ENST00000476594 KCTD2Q14681 263 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 TTC22Q5TAA0 569 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
CCM2-208ENST00000476594 FAM160B2Q86V87 743 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 DOCK3Q8IZD9 2030 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 CHURC1Q8WUH1 139 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 TRIB2Q92519 343 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 USP6NLQ92738 828 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 DEFB118Q96PH6 123 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 TEX13BQ9BXU2 312 aa12.07□□□□□ -0.48
CCM2-208ENST00000476594 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
CCM2-208ENST00000476594 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 MYH4Q9Y623 1939 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 PEX10O60683 326 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 FARP2O94887 1054 aaPredicted RBP12.06□□□□□ -0.48
CCM2-208ENST00000476594 BMP3P12645 472 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 KCNA4P22459 653 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 ADORA2AP29274 412 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 SLC1A4P43007 532 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 STAT2P52630 851 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 IMMTQ16891 758 aaKnown RBP12.06□□□□□ -0.48
CCM2-208ENST00000476594 RRP12Q5JTH9 1297 aaKnown RBP12.06□□□□□ -0.48
CCM2-208ENST00000476594 KIAA1755Q5JYT7 1200 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 AKNAD1Q5T1N1 836 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 RIOX2Q8IUF8 465 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
CCM2-208ENST00000476594 ESR2Q92731 530 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 GMCL1Q96IK5 515 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 DSCC1Q9BVC3 393 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 FBXO40Q9UH90 709 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 ADAMTS5Q9UNA0 930 aa12.06□□□□□ -0.48
CCM2-208ENST00000476594 ZNF236Q9UL36 1845 aa12.05□□□□□ -0.48
CCM2-208ENST00000476594 FOXP2O15409 715 aa12.05□□□□□ -0.48
CCM2-208ENST00000476594 FGRP09769 529 aa12.05□□□□□ -0.48
CCM2-208ENST00000476594 OAZ1P54368 228 aa12.05□□□□□ -0.48
CCM2-208ENST00000476594 TMEM132BQ14DG7 1078 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms