RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 SYT8Q8NBV8 401 aa8.69□□□□□ -1.02
NUP58-209ENST00000476553 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
NUP58-209ENST00000476553 GNEQ9Y223 722 aaKnown RBP8.69□□□□□ -1.02
NUP58-209ENST00000476553 NRDCO43847 1150 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 LIG3P49916 1009 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 ATP2B2Q01814 1243 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 CCDC85BQ15834 202 aaPredicted RBP8.68□□□□□ -1.02
NUP58-209ENST00000476553 SIRT2Q8IXJ6 389 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 ZDHHC14Q8IZN3 488 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 ASPNQ9BXN1 380 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 MIR1-1HGQ9H1L0 117 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 ADAM7Q9H2U9 754 aa8.68□□□□□ -1.02
NUP58-209ENST00000476553 CDR1P51861 262 aa8.67□□□□□ -1.02
NUP58-209ENST00000476553 TSNAXIP1Q2TAA8 658 aa8.67□□□□□ -1.02
NUP58-209ENST00000476553 SLFN12Q8IYM2 578 aa8.67□□□□□ -1.02
NUP58-209ENST00000476553 FAM13CQ8NE31 585 aa8.67□□□□□ -1.02
NUP58-209ENST00000476553 UPK3BL1B0FP48 263 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 UPK3BL2E5RIL1 263 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 KCNA1Q09470 495 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 VMACQ2NL98 169 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 FRMD5Q7Z6J6 570 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 FAM129CQ86XR2 697 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 MAP6Q96JE9 813 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 CORINQ9Y5Q5 1042 aa8.66□□□□□ -1.02
NUP58-209ENST00000476553 TFE3P19532 575 aaPredicted RBP8.65□□□□□ -1.02
NUP58-209ENST00000476553 KIR2DL1P43626 348 aaPredicted RBP8.65□□□□□ -1.02
NUP58-209ENST00000476553 KIR2DL2P43627 348 aaPredicted RBP8.65□□□□□ -1.02
NUP58-209ENST00000476553 YARSP54577 528 aaKnown RBP8.65□□□□□ -1.02
NUP58-209ENST00000476553 ZXDCQ2QGD7 858 aaPredicted RBP8.65□□□□□ -1.02
NUP58-209ENST00000476553 RNF111Q6ZNA4 994 aa8.65□□□□□ -1.02
NUP58-209ENST00000476553 MZB1Q8WU39 189 aa8.65□□□□□ -1.02
NUP58-209ENST00000476553 KREMEN1Q96MU8 473 aa8.65□□□□□ -1.02
NUP58-209ENST00000476553 FRMD6Q96NE9 622 aa8.65□□□□□ -1.02
NUP58-209ENST00000476553 ERVFRD-1P60508 538 aa8.64□□□□□ -1.03
NUP58-209ENST00000476553 CNKSR3Q6P9H4 555 aa8.64□□□□□ -1.03
NUP58-209ENST00000476553 LINC01356Q8N9X3 169 aa8.64□□□□□ -1.03
NUP58-209ENST00000476553 ASB16Q96NS5 453 aa8.64□□□□□ -1.03
NUP58-209ENST00000476553 CILPO75339 1184 aa8.63□□□□□ -1.03
NUP58-209ENST00000476553 OLFML2BQ68BL8 750 aa8.63□□□□□ -1.03
NUP58-209ENST00000476553 IGDCC3Q8IVU1 814 aa8.63□□□□□ -1.03
NUP58-209ENST00000476553 ZSCAN29Q8IWY8 852 aaPredicted RBP8.63□□□□□ -1.03
NUP58-209ENST00000476553 FAM177A1Q8N128 213 aaPredicted RBP8.63□□□□□ -1.03
NUP58-209ENST00000476553 HDAC8Q9BY41 377 aa8.63□□□□□ -1.03
NUP58-209ENST00000476553 BRD1O95696 1058 aa8.62□□□□□ -1.03
NUP58-209ENST00000476553 PNLIPP16233 465 aa8.62□□□□□ -1.03
NUP58-209ENST00000476553 PLCG1P19174 1290 aa8.62□□□□□ -1.03
NUP58-209ENST00000476553 TP53I13Q8NBR0 393 aaPredicted RBP8.62□□□□□ -1.03
NUP58-209ENST00000476553 SYTL5Q8TDW5 730 aaPredicted RBP8.62□□□□□ -1.03
NUP58-209ENST00000476553 TMEM82A0PJX8 343 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 ABLIM1O14639 778 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 SDHBP21912 280 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 MAP3K11Q16584 847 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 CLEC16AQ2KHT3 1053 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 ENOX1Q8TC92 643 aaKnown RBP8.61□□□□□ -1.03
NUP58-209ENST00000476553 HHIPL1Q96JK4 782 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 BDH2Q9BUT1 245 aa8.61□□□□□ -1.03
NUP58-209ENST00000476553 EIF4BP23588 611 aaKnown RBP8.6□□□□□ -1.03
NUP58-209ENST00000476553 RPL10P27635 214 aaKnown RBP8.6□□□□□ -1.03
NUP58-209ENST00000476553 WAPLQ7Z5K2 1190 aa8.6□□□□□ -1.03
NUP58-209ENST00000476553 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
NUP58-209ENST00000476553 PLCD4Q9BRC7 762 aa8.6□□□□□ -1.03
NUP58-209ENST00000476553 P4HBP07237 508 aaKnown RBP8.59□□□□□ -1.03
NUP58-209ENST00000476553 GNA15P30679 374 aa8.59□□□□□ -1.03
NUP58-209ENST00000476553 TNNI2P48788 182 aa8.59□□□□□ -1.03
NUP58-209ENST00000476553 PLP2Q04941 152 aa8.59□□□□□ -1.03
NUP58-209ENST00000476553 NMIQ13287 307 aaPredicted RBP8.59□□□□□ -1.03
NUP58-209ENST00000476553 SLC14A2Q15849 920 aa8.59□□□□□ -1.03
NUP58-209ENST00000476553 USHBP1Q8N6Y0 703 aa8.59□□□□□ -1.03
NUP58-209ENST00000476553 ZMYM5Q9UJ78 669 aa8.59□□□□□ -1.03
NUP58-209ENST00000476553 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
NUP58-209ENST00000476553 FOXP3Q9BZS1 431 aa8.58□□□□□ -1.04
NUP58-209ENST00000476553 KLHL14Q9P2G3 628 aa8.58□□□□□ -1.04
NUP58-209ENST00000476553 MYRFQ9Y2G1 1151 aa8.58□□□□□ -1.04
NUP58-209ENST00000476553 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
NUP58-209ENST00000476553 PRR36Q9H6K5 1346 aa8.57□□□□□ -1.04
NUP58-209ENST00000476553 CAP1Q01518 475 aa8.57□□□□□ -1.04
NUP58-209ENST00000476553 RTP5Q14D33 572 aa8.57□□□□□ -1.04
NUP58-209ENST00000476553 DAGLBQ8NCG7 672 aa8.57□□□□□ -1.04
NUP58-209ENST00000476553 PWWP2AQ96N64 755 aa8.57□□□□□ -1.04
NUP58-209ENST00000476553 CNOT11Q9UKZ1 510 aaKnown RBP8.57□□□□□ -1.04
NUP58-209ENST00000476553 PRICKLE3O43900 615 aaPredicted RBP8.56□□□□□ -1.04
NUP58-209ENST00000476553 INSRRP14616 1297 aa8.56□□□□□ -1.04
NUP58-209ENST00000476553 BBS9Q3SYG4 887 aa8.56□□□□□ -1.04
NUP58-209ENST00000476553 HHIPL2Q6UWX4 724 aa8.56□□□□□ -1.04
NUP58-209ENST00000476553 TMC6Q7Z403 805 aa8.56□□□□□ -1.04
NUP58-209ENST00000476553 CCDC84Q86UT8 332 aaPredicted RBP8.56□□□□□ -1.04
NUP58-209ENST00000476553 JARID2Q92833 1246 aaPredicted RBP8.56□□□□□ -1.04
NUP58-209ENST00000476553 CCDC74BQ96LY2 380 aa8.56□□□□□ -1.04
NUP58-209ENST00000476553 TCFL5Q9UL49 500 aa8.56□□□□□ -1.04
NUP58-209ENST00000476553 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
NUP58-209ENST00000476553 LINC00116Q8NCU8 138 aa8.55□□□□□ -1.04
NUP58-209ENST00000476553 TCTN2Q96GX1 697 aa8.55□□□□□ -1.04
NUP58-209ENST00000476553 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
NUP58-209ENST00000476553 REV1Q9UBZ9 1251 aa8.55□□□□□ -1.04
NUP58-209ENST00000476553 TLR6Q9Y2C9 796 aa8.55□□□□□ -1.04
NUP58-209ENST00000476553 FAM221AA4D161 298 aa8.54□□□□□ -1.04
NUP58-209ENST00000476553 FFAR3O14843 346 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms