RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 SPICE1Q8N0Z3 855 aa13.54□□□□□ -0.24
BEST3-204ENST00000476098 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
BEST3-204ENST00000476098 PHKBQ93100 1093 aa13.54□□□□□ -0.24
BEST3-204ENST00000476098 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
BEST3-204ENST00000476098 ELP3Q9H9T3 547 aa13.54□□□□□ -0.24
BEST3-204ENST00000476098 FRMPD2Q68DX3 1309 aaPredicted RBP13.54□□□□□ -0.24
BEST3-204ENST00000476098 PASKQ96RG2 1323 aa13.54□□□□□ -0.24
BEST3-204ENST00000476098 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
BEST3-204ENST00000476098 MTMR2Q13614 643 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
BEST3-204ENST00000476098 KCTD1Q719H9 257 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 C2orf69Q8N8R5 385 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 ZNF784Q8NCA9 323 aaPredicted RBP13.53□□□□□ -0.24
BEST3-204ENST00000476098 NUP88Q99567 741 aaPredicted RBP13.53□□□□□ -0.24
BEST3-204ENST00000476098 FEZ1Q99689 392 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 LZTS2Q9BRK4 669 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
BEST3-204ENST00000476098 MYH8P13535 1937 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 SPDYE5A6NIY4 337 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 CYTH3O43739 400 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 FMNL1O95466 1100 aaPredicted RBP13.53□□□□□ -0.24
BEST3-204ENST00000476098 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 PPATQ06203 517 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 TTBK2Q6IQ55 1244 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 SMC1BQ8NDV3 1235 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 CPVLQ9H3G5 476 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 GPCPD1Q9NPB8 672 aa13.53□□□□□ -0.24
BEST3-204ENST00000476098 ORC3Q9UBD5 711 aaPredicted RBP13.53□□□□□ -0.24
BEST3-204ENST00000476098 C19orf81C9J6K1 198 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 TOMM70O94826 608 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 BMP3P12645 472 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 USP14P54578 494 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 SSRP1Q08945 709 aaKnown RBP13.52□□□□□ -0.25
BEST3-204ENST00000476098 DGKZQ13574 1117 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 CCDC96Q2M329 555 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 LPAR1Q92633 364 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 SLC10A4Q96EP9 437 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.25
BEST3-204ENST00000476098 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
BEST3-204ENST00000476098 V9GY48 417 aaPredicted RBP13.52□□□□□ -0.25
BEST3-204ENST00000476098 CNTNAP5Q8WYK1 1306 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 IRF6O14896 467 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 PRPF3O43395 683 aaKnown RBP13.51□□□□□ -0.25
BEST3-204ENST00000476098 FAM83BQ5T0W9 1011 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 RBM46Q8TBY0 533 aaKnown RBP13.51□□□□□ -0.25
BEST3-204ENST00000476098 OPTNQ96CV9 577 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 SPZ1Q9BXG8 430 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
BEST3-204ENST00000476098 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 SLC16A2P36021 539 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 HMGCS2P54868 508 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 PPIL2Q13356 520 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 PKN1Q16512 942 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 BTNL9Q6UXG8 535 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 TRIM22Q8IYM9 498 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 FAM184AQ8NB25 1140 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 C12orf42Q96LP6 360 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 hCG_1642624A0A1W2PR95 340 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 CXCL11O14625 94 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
BEST3-204ENST00000476098 VCAM1P19320 739 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 SYT1P21579 422 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 GJA5P36382 358 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 ADGRF4Q8IZF3 695 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 AIFM3Q96NN9 605 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 JMJD4Q9H9V9 463 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 VAT1LQ9HCJ6 419 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 ISY1Q9ULR0 285 aaKnown RBP13.5□□□□□ -0.25
BEST3-204ENST00000476098 KCNH4Q9UQ05 1017 aa13.5□□□□□ -0.25
BEST3-204ENST00000476098 DOCK1Q14185 1865 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 PAPPA2Q9BXP8 1791 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 A0A0G2JLL6 359 aaPredicted RBP13.49□□□□□ -0.25
BEST3-204ENST00000476098 PLA2G6O60733 806 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 DEXIO95424 95 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 HUNKP57058 714 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 AKAP17AQ02040 695 aaKnown RBP13.49□□□□□ -0.25
BEST3-204ENST00000476098 LARP1BQ659C4 914 aaKnown RBP13.49□□□□□ -0.25
BEST3-204ENST00000476098 PRRT2Q7Z6L0 340 aaPredicted RBP13.49□□□□□ -0.25
BEST3-204ENST00000476098 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 MTMR8Q96EF0 704 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
BEST3-204ENST00000476098 PDCP20941 246 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 STAT2P52630 851 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 FSTL1Q12841 308 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 PKP1Q13835 747 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 PIGSQ96S52 555 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 ALG1Q9BT22 464 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 RBM27Q9P2N5 1060 aaKnown RBP13.48□□□□□ -0.25
BEST3-204ENST00000476098 FEM1BQ9UK73 627 aa13.48□□□□□ -0.25
BEST3-204ENST00000476098 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
BEST3-204ENST00000476098 PFKFB3Q16875 520 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms