RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 ZNF543Q08ER8 600 aa22.08■■□□□ 1.13
NR1H3-219ENST00000476086 ZYXQ15942 572 aaKnown RBP22.08■■□□□ 1.13
NR1H3-219ENST00000476086 MAD2L2Q9UI95 211 aa22.08■■□□□ 1.13
NR1H3-219ENST00000476086 ISY1Q9ULR0 285 aaKnown RBP22.08■■□□□ 1.13
NR1H3-219ENST00000476086 TMEM88BA6NKF7 163 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 KLRF2D3W0D1 207 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 WDR46O15213 610 aaKnown RBP22.07■■□□□ 1.12
NR1H3-219ENST00000476086 BMP3P12645 472 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 SMARCA1P28370 1054 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 CDC27P30260 824 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 ADD1P35611 737 aaKnown RBP22.07■■□□□ 1.12
NR1H3-219ENST00000476086 HMGN5P82970 282 aaKnown RBP22.07■■□□□ 1.12
NR1H3-219ENST00000476086 SH3D19Q5HYK7 790 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 C12orf42Q96LP6 360 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 FAM217BQ9NTX9 383 aaPredicted RBP22.07■■□□□ 1.12
NR1H3-219ENST00000476086 KIF3AQ9Y496 699 aa22.07■■□□□ 1.12
NR1H3-219ENST00000476086 IFNAR1P17181 557 aa22.06■■□□□ 1.12
NR1H3-219ENST00000476086 TMTC3Q6ZXV5 915 aa22.06■■□□□ 1.12
NR1H3-219ENST00000476086 TRIM22Q8IYM9 498 aa22.06■■□□□ 1.12
NR1H3-219ENST00000476086 SPICE1Q8N0Z3 855 aa22.06■■□□□ 1.12
NR1H3-219ENST00000476086 RBM27Q9P2N5 1060 aaKnown RBP22.06■■□□□ 1.12
NR1H3-219ENST00000476086 KCNH4Q9UQ05 1017 aa22.06■■□□□ 1.12
NR1H3-219ENST00000476086 SMC3Q9UQE7 1217 aa22.06■■□□□ 1.12
NR1H3-219ENST00000476086 LOC285556D6RIA3 1793 aa22.05■■□□□ 1.12
NR1H3-219ENST00000476086 IRF6O14896 467 aa22.05■■□□□ 1.12
NR1H3-219ENST00000476086 ZBTB48P10074 688 aaPredicted RBP22.05■■□□□ 1.12
NR1H3-219ENST00000476086 AKAP17AQ02040 695 aaKnown RBP22.05■■□□□ 1.12
NR1H3-219ENST00000476086 SAPCD2Q86UD0 394 aa22.05■■□□□ 1.12
NR1H3-219ENST00000476086 CHURC1Q8WUH1 139 aa22.05■■□□□ 1.12
NR1H3-219ENST00000476086 TLL2Q9Y6L7 1015 aa22.05■■□□□ 1.12
NR1H3-219ENST00000476086 FRMPD2Q68DX3 1309 aaPredicted RBP22.05■■□□□ 1.12
NR1H3-219ENST00000476086 HMGCS2P54868 508 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 SSRP1Q08945 709 aaKnown RBP22.04■■□□□ 1.12
NR1H3-219ENST00000476086 ST3GAL1Q11201 340 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 IKQ13123 557 aaPredicted RBP22.04■■□□□ 1.12
NR1H3-219ENST00000476086 SNAPC2Q13487 334 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 NTRK3Q16288 839 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 KCTD1Q719H9 257 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 FASTKD5Q7L8L6 764 aaKnown RBP22.04■■□□□ 1.12
NR1H3-219ENST00000476086 FAM160B2Q86V87 743 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 STAG2Q8N3U4 1231 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 PROCA1Q8NCQ7 364 aaPredicted RBP22.04■■□□□ 1.12
NR1H3-219ENST00000476086 NSUN7Q8NE18 718 aaKnown RBP22.04■■□□□ 1.12
NR1H3-219ENST00000476086 CNKSR2Q8WXI2 1034 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 WNK4Q96J92 1243 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 HHIPL1Q96JK4 782 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 SPZ1Q9BXG8 430 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 CWC22Q9HCG8 908 aaKnown RBP22.04■■□□□ 1.12
NR1H3-219ENST00000476086 GPCPD1Q9NPB8 672 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 EMILIN3Q9NT22 766 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 FEM1BQ9UK73 627 aa22.04■■□□□ 1.12
NR1H3-219ENST00000476086 ABT1Q9ULW3 272 aaKnown RBP22.04■■□□□ 1.12
NR1H3-219ENST00000476086 A0A0G2JLL6 359 aaPredicted RBP22.03■■□□□ 1.12
NR1H3-219ENST00000476086 PLA2G6O60733 806 aa22.03■■□□□ 1.12
NR1H3-219ENST00000476086 GOLGA8HP0CJ92 632 aa22.03■■□□□ 1.12
NR1H3-219ENST00000476086 STAT2P52630 851 aa22.03■■□□□ 1.12
NR1H3-219ENST00000476086 FAM83BQ5T0W9 1011 aa22.03■■□□□ 1.12
NR1H3-219ENST00000476086 RGMBQ6NW40 437 aa22.03■■□□□ 1.12
NR1H3-219ENST00000476086 PRRT2Q7Z6L0 340 aaPredicted RBP22.03■■□□□ 1.12
NR1H3-219ENST00000476086 RNF26Q9BY78 433 aaPredicted RBP22.03■■□□□ 1.12
NR1H3-219ENST00000476086 STK36Q9NRP7 1315 aa22.03■■□□□ 1.12
NR1H3-219ENST00000476086 PTPDC1A2A3K4 754 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 TMEM232C9JQI7 657 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 PLEKHA8P1O95397 391 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 VCAM1P19320 739 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 SLC4A3P48751 1232 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 ZNF157P51786 506 aaPredicted RBP22.02■■□□□ 1.12
NR1H3-219ENST00000476086 GTF2A2P52657 109 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 KIAA1755Q5JYT7 1200 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 SRBD1Q8N5C6 995 aaKnown RBP22.02■■□□□ 1.12
NR1H3-219ENST00000476086 FAM184AQ8NB25 1140 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 SMARCC2Q8TAQ2 1214 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 WASF1Q92558 559 aa22.02■■□□□ 1.12
NR1H3-219ENST00000476086 NUP88Q99567 741 aaPredicted RBP22.02■■□□□ 1.12
NR1H3-219ENST00000476086 FMNL1O95466 1100 aaPredicted RBP22.01■■□□□ 1.11
NR1H3-219ENST00000476086 CTDNEP1O95476 244 aa22.01■■□□□ 1.11
NR1H3-219ENST00000476086 SPRYD7Q5W111 196 aa22.01■■□□□ 1.11
NR1H3-219ENST00000476086 BTNL9Q6UXG8 535 aa22.01■■□□□ 1.11
NR1H3-219ENST00000476086 CCDC82Q8N4S0 544 aa22.01■■□□□ 1.11
NR1H3-219ENST00000476086 CCDC102AQ96A19 550 aa22.01■■□□□ 1.11
NR1H3-219ENST00000476086 SLC26A6Q9BXS9 759 aa22.01■■□□□ 1.11
NR1H3-219ENST00000476086 TANGO6Q9C0B7 1094 aa22.01■■□□□ 1.11
NR1H3-219ENST00000476086 ORC3Q9UBD5 711 aaPredicted RBP22.01■■□□□ 1.11
NR1H3-219ENST00000476086 PRPF3O43395 683 aaKnown RBP22■■□□□ 1.11
NR1H3-219ENST00000476086 CETPP11597 493 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 PDIA4P13667 645 aaKnown RBP22■■□□□ 1.11
NR1H3-219ENST00000476086 PABPC4Q13310 644 aaKnown RBP eCLIP22■■□□□ 1.11
NR1H3-219ENST00000476086 GADL1Q6ZQY3 521 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 RASGRP2Q7LDG7 609 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 NBPF11Q86T75 865 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 SPRYD3Q8NCJ5 442 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 PHKBQ93100 1093 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 RRP36Q96EU6 259 aaKnown RBP22■■□□□ 1.11
NR1H3-219ENST00000476086 RPAP3Q9H6T3 665 aaPredicted RBP22■■□□□ 1.11
NR1H3-219ENST00000476086 RIOX1Q9H6W3 641 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 FOXD4L1Q9NU39 408 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 SEC63Q9UGP8 760 aaKnown RBP22■■□□□ 1.11
NR1H3-219ENST00000476086 CNTNAP5Q8WYK1 1306 aa22■■□□□ 1.11
NR1H3-219ENST00000476086 PARP14Q460N5 1801 aa21.99■■□□□ 1.11
NR1H3-219ENST00000476086 USP17L15C9J2P7 530 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms