RNA–Protein interactions for RNA: ENST00000475722.5

PRUNE1-210, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 3

Gene PRUNE1, Length 916 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-210ENST00000475722 NUP88Q99567 741 aaPredicted RBP17.48■□□□□ 0.39
PRUNE1-210ENST00000475722 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
PRUNE1-210ENST00000475722 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
PRUNE1-210ENST00000475722 A0A0G2JLL6 359 aaPredicted RBP17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 GOLGA8HP0CJ92 632 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 ZBTB48P10074 688 aaPredicted RBP17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 BMP3P12645 472 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 CDC27P30260 824 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 ADD1P35611 737 aaKnown RBP17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 BECN1Q14457 450 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 ASPRV1Q53RT3 343 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 PRRT2Q7Z6L0 340 aaPredicted RBP17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 RASAL3Q86YV0 1011 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 STAG2Q8N3U4 1231 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 TMOD4Q9NZQ9 345 aa17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
PRUNE1-210ENST00000475722 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 WDR46O15213 610 aaKnown RBP17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 VCAM1P19320 739 aa17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 SNAPC2Q13487 334 aa17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 GPATCH4Q5T3I0 446 aaKnown RBP17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 KCTD1Q719H9 257 aa17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
PRUNE1-210ENST00000475722 PLEKHA8P1O95397 391 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 SLC10A3P09131 477 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 GNAQP50148 359 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 GTF2A2P52657 109 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 CUL4AQ13619 759 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 PROCA1Q8NCQ7 364 aaPredicted RBP17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 MS4A4AQ96JQ5 239 aa17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
PRUNE1-210ENST00000475722 KLRF2D3W0D1 207 aa17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 MOGSQ13724 837 aa17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 NTRK3Q16288 839 aa17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 TTBK2Q6IQ55 1244 aa17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 GADL1Q6ZQY3 521 aa17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 FASTKD5Q7L8L6 764 aaKnown RBP17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 CMTR1Q8N1G2 835 aaKnown RBP17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 SRBD1Q8N5C6 995 aaKnown RBP17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 RPAP3Q9H6T3 665 aaPredicted RBP17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 PTPRFP10586 1907 aa17.44■□□□□ 0.38
PRUNE1-210ENST00000475722 RASSF10A6NK89 507 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 FAM155AB1AL88 458 aaPredicted RBP17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 TMEM232C9JQI7 657 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 CPLX1O14810 134 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 CTDNEP1O95476 244 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 CETPP11597 493 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 FUT2Q10981 343 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 NBPF11Q86T75 865 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 LZTS2Q9BRK4 669 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 CPVLQ9H3G5 476 aa17.43■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L15C9J2P7 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L13C9JLJ4 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L11C9JVI0 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L18D6R9N7 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L22D6RA61 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L17D6RBQ6 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L19D6RCP7 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L20D6RJB6 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 PLA2G6O60733 806 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 IFNAR1P17181 557 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 SLC16A2P36021 539 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 USP17L24Q0WX57 530 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 SLC35G1Q2M3R5 365 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 DEFB115Q30KQ5 88 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 TREML2Q5T2D2 321 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 CPLX2Q6PUV4 134 aaKnown RBP17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 BTNL9Q6UXG8 535 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 CCDC82Q8N4S0 544 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 CHURC1Q8WUH1 139 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 LLPHQ9BRT6 129 aaKnown RBP17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 FEM1BQ9UK73 627 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 LOC285556D6RIA3 1793 aa17.42■□□□□ 0.38
PRUNE1-210ENST00000475722 CCL15-CCL14A0A0B4J2E2 113 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 STAT2P52630 851 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 CCL15Q16663 113 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 CYP4F22Q6NT55 531 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 GPAT2Q6NUI2 795 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 CATSPERGQ6ZRH7 1159 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 PAXIP1Q6ZW49 1069 aaPredicted RBP17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 FAM160B2Q86V87 743 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 BRI3BPQ8WY22 251 aa17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 INTS4Q96HW7 963 aaKnown RBP17.41■□□□□ 0.38
PRUNE1-210ENST00000475722 RIOX1Q9H6W3 641 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms