RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 IVNS1ABPQ9Y6Y0 642 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 COL6A3P12111 3177 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 MINDY4BA8MYZ0 360 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 F5H6K3 240 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 GPAA1O43292 621 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 PRDM1O75626 825 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 PGK2P07205 417 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 MAGEA10P43363 369 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-207ENST00000475549 KLRC3Q07444 240 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 PLS1Q14651 629 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 FAM83BQ5T0W9 1011 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 ANO1Q5XXA6 986 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 GIMAP6Q6P9H5 292 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 DPP9Q86TI2 863 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 NCAPG2Q86XI2 1143 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 ABRAQ8N0Z2 381 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 MB21D1Q8N884 522 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 SENP6Q9GZR1 1112 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-207ENST00000475549 MROH8Q9H579 483 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 CWC22Q9HCG8 908 aaKnown RBP8.42□□□□□ -1.06
HDAC3-207ENST00000475549 INCENPQ9NQS7 918 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 ARPP21Q9UBL0 812 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-207ENST00000475549 ZNF214Q9UL59 606 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-207ENST00000475549 PPP1R9AQ9ULJ8 1098 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 RIPK3Q9Y572 518 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 SALL3Q9BXA9 1300 aa8.42□□□□□ -1.06
HDAC3-207ENST00000475549 LAMA2P24043 3122 aaKnown RBP8.42□□□□□ -1.06
HDAC3-207ENST00000475549 A0A0C4DFX4 3053 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 A0A1W2PPC1 479 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 PATL2C9JE40 543 aaKnown RBP8.41□□□□□ -1.06
HDAC3-207ENST00000475549 ABCB7O75027 752 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 TAL1P17542 331 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-207ENST00000475549 CNGA1P29973 690 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 STAT3P40763 770 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 ZNF792Q3KQV3 632 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 GJC2Q5T442 439 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-207ENST00000475549 RIOX2Q8IUF8 465 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 IFNL3Q8IZI9 196 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 MKL1Q969V6 931 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 MAML3Q96JK9 1138 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 SH2D4AQ9H788 454 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 NYAP2Q9P242 653 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 MYH1P12882 1939 aa8.41□□□□□ -1.06
HDAC3-207ENST00000475549 ROBO3Q96MS0 1386 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 TTC41PQ6P2S7 1318 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 DNM1LO00429 736 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 SEPT4O43236 478 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 RAD21O60216 631 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 NDUFB10O96000 172 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 APPP05067 770 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 ZFYP08048 801 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-207ENST00000475549 FCER1AP12319 257 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 ATN1P54259 1190 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-207ENST00000475549 RRP1P56182 461 aaKnown RBP8.4□□□□□ -1.06
HDAC3-207ENST00000475549 ZMYM1Q5SVZ6 1142 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 AMOTL1Q8IY63 956 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 CEP95Q96GE4 821 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 CRBNQ96SW2 442 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 MKNK2Q9HBH9 465 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 GOPCQ9HD26 462 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 MTMR4Q9NYA4 1195 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 CLIP2Q9UDT6 1046 aa8.4□□□□□ -1.06
HDAC3-207ENST00000475549 MSCO60682 206 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 SLC25A27O95847 323 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 SNAI1O95863 264 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-207ENST00000475549 ZNF865P0CJ78 1059 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-207ENST00000475549 GNAT2P19087 354 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 MX1P20591 662 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 MDM2Q00987 491 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-207ENST00000475549 LRIT3Q3SXY7 679 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 FAM47AQ5JRC9 791 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 VPS53Q5VIR6 699 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 CCDC129Q6ZRS4 1044 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 GPATCH3Q96I76 525 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 SLF1Q9BQI6 1058 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 IL17RBQ9NRM6 502 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 RLFQ13129 1914 aa8.39□□□□□ -1.07
HDAC3-207ENST00000475549 DNAJC25-GNG10A0A024R161 153 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 ATP2A1O14983 1001 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 NMT2O60551 498 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 TDO2P48775 406 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 TFAP4Q01664 338 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 PPARAQ07869 468 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 LRRC41Q15345 812 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 ANKRD45Q5TZF3 282 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 SNRNP48Q6IEG0 339 aaKnown RBP8.38□□□□□ -1.07
HDAC3-207ENST00000475549 SLC39A5Q6ZMH5 540 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 TDHQ8IZJ6 230 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 ZNF444Q8N0Y2 327 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-207ENST00000475549 LRRC47Q8N1G4 583 aaKnown RBP8.38□□□□□ -1.07
HDAC3-207ENST00000475549 PRPF38AQ8NAV1 312 aaKnown RBP8.38□□□□□ -1.07
HDAC3-207ENST00000475549 GMCL1P1Q8NEA9 526 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 NEDD1Q8NHV4 660 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 LENG1Q96BZ8 264 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-207ENST00000475549 FGD4Q96M96 766 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 MMP19Q99542 508 aa8.38□□□□□ -1.07
HDAC3-207ENST00000475549 FSD1Q9BTV5 496 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms