RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TAB3Q8N5C8 712 aaPredicted RBP12.11□□□□□ -0.47
VAPB-204ENST00000475243 VPS37BQ9H9H4 285 aa12.11□□□□□ -0.47
VAPB-204ENST00000475243 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 BUB1O43683 1085 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 MCUR1Q96AQ8 359 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 IGBP1P78318 339 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 CCDC62Q6P9F0 684 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 XPO4Q9C0E2 1151 aaKnown RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 PANK4Q9NVE7 773 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 ITKQ08881 620 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 CERS3Q8IU89 383 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 CTAGE3PQ8IX95 158 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 ZSCAN10Q96SZ4 725 aaPredicted RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 XRCC5P13010 732 aaKnown RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 PTH1RQ03431 593 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 GPR162Q16538 588 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 KAZNQ674X7 775 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 VSIG1Q86XK7 387 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 SYCE1Q8N0S2 351 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 IFNL3Q8IZI9 196 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 ANKRD42Q8N9B4 389 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 GABPB2Q8TAK5 448 aaPredicted RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 TXNDC9O14530 226 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 CAPN9O14815 690 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 DIXDC1Q155Q3 683 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 LIG4P49917 911 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 SLC12A2P55011 1212 aa12.1□□□□□ -0.47
VAPB-204ENST00000475243 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
VAPB-204ENST00000475243 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 XKR9Q5GH70 373 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 ARHGAP27Q6ZUM4 889 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 AFAP1L2Q8N4X5 818 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 RSRC1Q96IZ7 334 aaKnown RBP12.09□□□□□ -0.47
VAPB-204ENST00000475243 COX16Q9P0S2 106 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 UHRF1BP1Q6BDS2 1440 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 I3L4J1 428 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 SAT1P21673 171 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 STAT1P42224 750 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 GBP6Q6ZN66 633 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 NCAPG2Q86XI2 1143 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 DESI2Q9BSY9 194 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 DDX25Q9UHL0 483 aaKnown RBP12.09□□□□□ -0.47
VAPB-204ENST00000475243 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
VAPB-204ENST00000475243 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
VAPB-204ENST00000475243 KCNK3O14649 394 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 P4HA1P13674 534 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 ATF7P17544 494 aaPredicted RBP12.09□□□□□ -0.47
VAPB-204ENST00000475243 KCNJ12Q14500 433 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 SND1Q7KZF4 910 aaKnown RBP eCLIP12.09□□□□□ -0.47
VAPB-204ENST00000475243 PALM2Q8IXS6 379 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 ANKFY1Q9P2R3 1169 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 ARPP21Q9UBL0 812 aaPredicted RBP12.09□□□□□ -0.47
VAPB-204ENST00000475243 LRRC24Q50LG9 513 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 K7ENM7 598 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 MORC3Q14149 939 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 BLIDQ8IZY5 108 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 KRT12Q99456 494 aa12.09□□□□□ -0.47
VAPB-204ENST00000475243 AOX1Q06278 1338 aa12.08□□□□□ -0.47
VAPB-204ENST00000475243 ATP5JP18859 108 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 PDE6BP35913 854 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 CCDC127Q96BQ5 260 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 KLRF2D3W0D1 207 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
VAPB-204ENST00000475243 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 DSCC1Q9BVC3 393 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 NUF2Q9BZD4 464 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 SPC25Q9HBM1 224 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 SLC39A2Q9NP94 309 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 STK38LQ9Y2H1 464 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 POLA2Q14181 598 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 ZNF827Q17R98 1081 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 ARHGAP6O43182 974 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 RUFY4Q6ZNE9 571 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 PNMA1Q8ND90 353 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 NT5C3AQ9H0P0 336 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 CD2APQ9Y5K6 639 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 PFKFB1P16118 471 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 KRT71Q3SY84 523 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
VAPB-204ENST00000475243 SLAIN2Q9P270 581 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 TBX22Q9Y458 520 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 LPXNO60711 386 aa12.08□□□□□ -0.48
VAPB-204ENST00000475243 GBP1P32455 592 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms