RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 PUF60Q9UHX1 559 aaKnown RBP15.91■□□□□ 0.14
RPGR-206ENST00000474584 LRRC10BA6NIK2 292 aa15.9■□□□□ 0.14
RPGR-206ENST00000474584 CTR9Q6PD62 1173 aa15.9■□□□□ 0.14
RPGR-206ENST00000474584 ANKRD18AQ8IVF6 992 aa15.9■□□□□ 0.14
RPGR-206ENST00000474584 MYH14Q7Z406 1995 aaKnown RBP15.9■□□□□ 0.14
RPGR-206ENST00000474584 COL4A1P02462 1669 aa15.9■□□□□ 0.14
RPGR-206ENST00000474584 A0A0G2JS52 829 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 A0A0U1RQJ8 604 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 MCM7P33993 719 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 COPB1P53618 953 aaKnown RBP15.89■□□□□ 0.13
RPGR-206ENST00000474584 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
RPGR-206ENST00000474584 TXLNBQ8N3L3 684 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 SRBD1Q8N5C6 995 aaKnown RBP15.89■□□□□ 0.13
RPGR-206ENST00000474584 HNRNPLLQ8WVV9 542 aaKnown RBP15.89■□□□□ 0.13
RPGR-206ENST00000474584 ATRIPQ8WXE1 791 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 TAF1P21675 1872 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 KCNJ18B7U540 433 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 USP17L12C9JPN9 530 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 USP17L21D6R901 530 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 ERLIN1O75477 346 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 KCNJ12Q14500 433 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 TCP11X2Q5H9J9 407 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 ARL6IP4Q66PJ3 421 aaKnown RBP15.89■□□□□ 0.13
RPGR-206ENST00000474584 SLC35F6Q8N357 371 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 NELFBQ8WX92 580 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 NAPGQ99747 312 aaPredicted RBP15.89■□□□□ 0.13
RPGR-206ENST00000474584 VPS16Q9H269 839 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
RPGR-206ENST00000474584 ORC4O43929 436 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 PFKFB3Q16875 520 aaPredicted RBP15.88■□□□□ 0.13
RPGR-206ENST00000474584 ANKZF1Q9H8Y5 726 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 TAB2Q9NYJ8 693 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 CCDC88AQ3V6T2 1871 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 RPN1P04843 607 aaKnown RBP15.88■□□□□ 0.13
RPGR-206ENST00000474584 CALML3P27482 149 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 LONP1P36776 959 aaKnown RBP15.88■□□□□ 0.13
RPGR-206ENST00000474584 ERVK-24P63145 666 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 PIP4K2BP78356 416 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 WHAMMP3Q1A5X7 153 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 MSANTD4Q8NCY6 345 aa15.88■□□□□ 0.13
RPGR-206ENST00000474584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
RPGR-206ENST00000474584 COBLO75128 1261 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 KIF5BP33176 963 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 STAT6P42226 847 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 USP5P45974 858 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 MTRQ99707 1265 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 RAB21Q9UL25 225 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 MAST2Q6P0Q8 1798 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 LOC102724428A0A0B4J2F2 783 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 MAP2K7O14733 419 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 KRT9P35527 623 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 SIK1P57059 783 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 HDXQ7Z353 690 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 CRNKL1Q9BZJ0 848 aaKnown RBP15.87■□□□□ 0.13
RPGR-206ENST00000474584 ZCCHC17Q9NP64 241 aaKnown RBP15.87■□□□□ 0.13
RPGR-206ENST00000474584 BSDC1Q9NW68 430 aaPredicted RBP15.87■□□□□ 0.13
RPGR-206ENST00000474584 KIAA1551Q9HCM1 1747 aa15.87■□□□□ 0.13
RPGR-206ENST00000474584 MYH1P12882 1939 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 ZNF335Q9H4Z2 1342 aaPredicted RBP15.86■□□□□ 0.13
RPGR-206ENST00000474584 CTAGE15A4D2H0 777 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 NMT2O60551 498 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 EIF3JO75822 258 aaKnown RBP15.86■□□□□ 0.13
RPGR-206ENST00000474584 CTAGE8P0CG41 777 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 UBXN1Q04323 297 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 IL17AQ16552 155 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 CTAGE6Q86UF2 777 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 CTAGE4Q8IX94 777 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
RPGR-206ENST00000474584 H7C1D1 291 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 TUBBP07437 444 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 ST5P78524 1137 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 NEK11Q8NG66 645 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 ZNF384Q8TF68 577 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 ARPP21Q9UBL0 812 aaPredicted RBP15.85■□□□□ 0.13
RPGR-206ENST00000474584 TSPY2A6NKD2 308 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 CDC25AP30304 524 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 FAM47AQ5JRC9 791 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 BEND6Q5SZJ8 279 aaPredicted RBP15.85■□□□□ 0.13
RPGR-206ENST00000474584 BLIDQ8IZY5 108 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 NSUN4Q96CB9 384 aaKnown RBP15.85■□□□□ 0.13
RPGR-206ENST00000474584 FAM84BQ96KN1 310 aaPredicted RBP15.85■□□□□ 0.13
RPGR-206ENST00000474584 PNKPQ96T60 521 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 GBP3Q9H0R5 595 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 DCP1AQ9NPI6 582 aaPredicted RBP15.85■□□□□ 0.13
RPGR-206ENST00000474584 ATP8A2Q9NTI2 1148 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 GDAQ9Y2T3 454 aa15.85■□□□□ 0.13
RPGR-206ENST00000474584 ARHGAP25P42331 645 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 PRCPP42785 496 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 RASSF8Q8NHQ8 419 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 SLF1Q9BQI6 1058 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 DISC1Q9NRI5 854 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 MAPK8IP1Q9UQF2 711 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 HNRNPH2P55795 449 aaKnown RBP15.84■□□□□ 0.13
RPGR-206ENST00000474584 MECOMQ03112 1051 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 ITPK1Q13572 414 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 STIM1Q13586 685 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 MCM6Q14566 821 aa15.84■□□□□ 0.13
RPGR-206ENST00000474584 MSL3Q8N5Y2 521 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms