RNA–Protein interactions for RNA: ENST00000474106.5

SVIL-208, Transcript of supervillin, human

TSL 4

Gene SVIL, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SVIL-208	ENST00000474106	NCL	P19338	710 aa	Known RBP	13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	SLC16A2	P36021	539 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	KLRC3	Q07444	240 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	ZNF543	Q08ER8	600 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	FUT2	Q10981	343 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	GNL2	Q13823	731 aa	Known RBP	13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	NFKBIB	Q15653	356 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	ASPRV1	Q53RT3	343 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	MAP1S	Q66K74	1059 aa	Predicted RBP	13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	TTBK2	Q6IQ55	1244 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	PNMA8A	Q86V59	439 aa	Predicted RBP	13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	MKL1	Q969V6	931 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	CDCA5	Q96FF9	252 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	ZNF408	Q9H9D4	720 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	GOPC	Q9HD26	462 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	PICK1	Q9NRD5	415 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	VPS54	Q9P1Q0	977 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	KCNJ14	Q9UNX9	436 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	SSC5D	A1L4H1	1573 aa		13.87	□□□□□ -0.19
SVIL-208	ENST00000474106	BAG4	O95429	457 aa	Known RBP	13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	NDUFB10	O96000	172 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	NF2	P35240	595 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	SLC1A4	P43007	532 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	TPRN	Q4KMQ1	711 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	KRT40	Q6A162	431 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	FAM173B	Q6P4H8	233 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	SCYL3	Q8IZE3	742 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	ZC3H15	Q8WU90	426 aa	Known RBP	13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	DCAF4	Q8WV16	495 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	LZTS2	Q9BRK4	669 aa		13.86	□□□□□ -0.19
SVIL-208	ENST00000474106	CYTH3	O43739	400 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	USP2	O75604	605 aa	Predicted RBP	13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	XBP1	P17861	261 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	REST	Q13127	1097 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	PKN1	Q16512	942 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	SLC35G1	Q2M3R5	365 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	HEATR3	Q7Z4Q2	680 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	RRP36	Q96EU6	259 aa	Known RBP	13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	PIGS	Q96S52	555 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	SH2D4A	Q9H788	454 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	NMRK2	Q9NPI5	230 aa		13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	SEC63	Q9UGP8	760 aa	Known RBP	13.85	□□□□□ -0.19
SVIL-208	ENST00000474106	TRAF5	O00463	557 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	PPP1R12B	O60237	982 aa	Predicted RBP	13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	SNHG28	P0DPA3	235 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	BMP3	P12645	472 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	SCG2	P13521	617 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	PDIA4	P13667	645 aa	Known RBP	13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	VEGFA	P15692	232 aa	Predicted RBP	13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	SNAP25	P60880	206 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	DGKZ	Q13574	1117 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	KIAA1755	Q5JYT7	1200 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	FAM83B	Q5T0W9	1011 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	GPATCH4	Q5T3I0	446 aa	Known RBP	13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	MOB2	Q70IA6	237 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	GMCL1P1	Q8NEA9	526 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	FBXO18	Q8NFZ0	1043 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	KLRG1	Q96E93	195 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	ZNF112	Q9UJU3	913 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	TMX2	Q9Y320	296 aa		13.84	□□□□□ -0.19
SVIL-208	ENST00000474106	TRIM75P	A6NK02	468 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	USP17L10	C9JJH3	530 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	TMEM232	C9JQI7	657 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	MCM4	P33991	863 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	NLRP5	P59047	1200 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	DNM1	Q05193	864 aa	Known RBP	13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	FMR1	Q06787	632 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	SAFB	Q15424	915 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	PFKFB3	Q16875	520 aa	Predicted RBP	13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	ADGRF4	Q8IZF3	695 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	SPZ1	Q9BXG8	430 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	VCPKMT	Q9H867	229 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	AS3MT	Q9HBK9	375 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	GDPD2	Q9HCC8	539 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	CNPY2	Q9Y2B0	182 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	ATP6V1D	Q9Y5K8	247 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	ZHX2	Q9Y6X8	837 aa		13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.83	□□□□□ -0.2
SVIL-208	ENST00000474106	KIF28P	B7ZC32	967 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	GOLGA6L22	H0YM25	854 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	PTPRA	P18433	802 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	IREB2	P48200	963 aa	Known RBP	13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	MAP3K9	P80192	1104 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	CEBPZ	Q03701	1054 aa	Known RBP	13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	SPP2	Q13103	211 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	MTMR2	Q13614	643 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	VGLL4	Q14135	290 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	GMCL1	Q96IK5	515 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	ELP3	Q9H9T3	547 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	GINM1	Q9NU53	330 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	RBM27	Q9P2N5	1060 aa	Known RBP	13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	TFIP11	Q9UBB9	837 aa	Known RBP	13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	CSAD	Q9Y600	493 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	OTOF	Q9HC10	1997 aa		13.82	□□□□□ -0.2
SVIL-208	ENST00000474106	FIBP	O43427	364 aa		13.81	□□□□□ -0.2
SVIL-208	ENST00000474106	MMP1	P03956	469 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms