RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 USP17L2Q6R6M4 530 aa22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 RASGRP2Q7LDG7 609 aa22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 RIOX1Q9H6W3 641 aa22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 FOXD4L1Q9NU39 408 aa22.58■■□□□ 1.21
CHMP2B-204ENST00000472024 C19orf81C9J6K1 198 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 USP17L10C9JJH3 530 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 KLRF2D3W0D1 207 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 PDCP20941 246 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 BACE1P56817 501 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 PPATQ06203 517 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 KIAA1755Q5JYT7 1200 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 CCDC84Q86UT8 332 aaPredicted RBP22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 ERO1BQ86YB8 467 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 SPRYD3Q8NCJ5 442 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 RBM46Q8TBY0 533 aaKnown RBP22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 TRPM7Q96QT4 1865 aa22.57■■□□□ 1.2
CHMP2B-204ENST00000472024 CYTH3O43739 400 aa22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 SLC1A4P43007 532 aa22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 SSRP1Q08945 709 aaKnown RBP22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 PRKG1Q13976 671 aa22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 TRIM22Q8IYM9 498 aa22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 MTMR8Q96EF0 704 aa22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 GBA2Q9HCG7 927 aaPredicted RBP22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 ORC3Q9UBD5 711 aaPredicted RBP22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 ZHX2Q9Y6X8 837 aa22.56■■□□□ 1.2
CHMP2B-204ENST00000472024 WDR46O15213 610 aaKnown RBP22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 DEXIO95424 95 aa22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 BMP3P12645 472 aa22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 C1QTNF8P60827 252 aa22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 FMR1Q06787 632 aaKnown RBP eCLIP22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 MOB2Q70IA6 237 aa22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 FAM177A1Q8N128 213 aaPredicted RBP22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 PHKBQ93100 1093 aa22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 CHMP5Q9NZZ3 219 aa22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 KCNH4Q9UQ05 1017 aa22.55■■□□□ 1.2
CHMP2B-204ENST00000472024 CXCL11O14625 94 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 SPP2Q13103 211 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 PPIL2Q13356 520 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 PKN1Q16512 942 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 CST9Q5W186 159 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 WASF1Q92558 559 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 CLMNQ96JQ2 1002 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 SLC26A6Q9BXS9 759 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 EMILIN3Q9NT22 766 aa22.54■■□□□ 1.2
CHMP2B-204ENST00000472024 PTPRFP10586 1907 aa22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 CELF2O95319 508 aaKnown RBP22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 GOLGA8HP0CJ92 632 aa22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 SYT1P21579 422 aa22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 NUCB2P80303 420 aa22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 TTLL12Q14166 644 aaPredicted RBP22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 CMTR1Q8N1G2 835 aaKnown RBP22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 SMC1BQ8NDV3 1235 aa22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 DDX11Q96FC9 970 aa22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 FEZ1Q99689 392 aa22.53■■□□□ 1.2
CHMP2B-204ENST00000472024 UBE2Q2LH0YL09 131 aa22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 BRD1O95696 1058 aa22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 MTMR2Q13614 643 aa22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 PFKFB3Q16875 520 aaPredicted RBP22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 CCDC96Q2M329 555 aa22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 C2orf69Q8N8R5 385 aa22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 FAM184AQ8NB25 1140 aa22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 LOC285556D6RIA3 1793 aa22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 FRMPD2Q68DX3 1309 aaPredicted RBP22.52■■□□□ 1.2
CHMP2B-204ENST00000472024 IFFO2Q5TF58 517 aa22.51■■□□□ 1.19
CHMP2B-204ENST00000472024 LARP1BQ659C4 914 aaKnown RBP22.51■■□□□ 1.19
CHMP2B-204ENST00000472024 KCTD1Q719H9 257 aa22.51■■□□□ 1.19
CHMP2B-204ENST00000472024 FAM160B2Q86V87 743 aa22.51■■□□□ 1.19
CHMP2B-204ENST00000472024 ELP3Q9H9T3 547 aa22.51■■□□□ 1.19
CHMP2B-204ENST00000472024 V9GY48 417 aaPredicted RBP22.51■■□□□ 1.19
CHMP2B-204ENST00000472024 A0A0G2JLL6 359 aaPredicted RBP22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 hCG_1984214I3L0E3 225 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 STX6O43752 255 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 TOMM70O94826 608 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 VCAM1P19320 739 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 TTBK2Q6IQ55 1244 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 PRRT2Q7Z6L0 340 aaPredicted RBP22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 ZNF713Q8N859 430 aaPredicted RBP22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 FBXO18Q8NFZ0 1043 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 NUP88Q99567 741 aaPredicted RBP22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 JMJD4Q9H9V9 463 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 GPCPD1Q9NPB8 672 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 FEM1BQ9UK73 627 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 MTMR7Q9Y216 660 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 MTMR6Q9Y217 621 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 ZDHHC9Q9Y397 364 aa22.5■■□□□ 1.19
CHMP2B-204ENST00000472024 MYH6P13533 1939 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 TRIM75PA6NK02 468 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 SCG2P13521 617 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 AKAP17AQ02040 695 aaKnown RBP22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 FAM83BQ5T0W9 1011 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 ADGRF4Q8IZF3 695 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 SPICE1Q8N0Z3 855 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 CHURC1Q8WUH1 139 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 ALG1Q9BT22 464 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 ZNF408Q9H9D4 720 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 SH3GLB2Q9NR46 395 aa22.49■■□□□ 1.19
CHMP2B-204ENST00000472024 TMEM232C9JQI7 657 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 IRF6O14896 467 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 DTNBO60941 627 aa22.48■■□□□ 1.19
CHMP2B-204ENST00000472024 STAT2P52630 851 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms