RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 CALM3P0DP25 149 aa17.4■□□□□ 0.38
GCOM1-206ENST00000471563 PPP2R5BQ15173 497 aa17.4■□□□□ 0.38
GCOM1-206ENST00000471563 TERF2Q15554 542 aa17.4■□□□□ 0.38
GCOM1-206ENST00000471563 ZRSR1Q15695 479 aaKnown RBP17.4■□□□□ 0.38
GCOM1-206ENST00000471563 HHIPL2Q6UWX4 724 aa17.4■□□□□ 0.38
GCOM1-206ENST00000471563 PNMA1Q8ND90 353 aa17.4■□□□□ 0.38
GCOM1-206ENST00000471563 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
GCOM1-206ENST00000471563 KCNG4Q8TDN1 519 aa17.4■□□□□ 0.38
GCOM1-206ENST00000471563 KAT14Q9H8E8 782 aa17.4■□□□□ 0.38
GCOM1-206ENST00000471563 MYH1P12882 1939 aa17.39■□□□□ 0.37
GCOM1-206ENST00000471563 YEATS4O95619 227 aa17.39■□□□□ 0.37
GCOM1-206ENST00000471563 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
GCOM1-206ENST00000471563 NR5A1Q13285 461 aa17.39■□□□□ 0.37
GCOM1-206ENST00000471563 ARMCX5Q6P1M9 558 aa17.39■□□□□ 0.37
GCOM1-206ENST00000471563 DGKHQ86XP1 1220 aa17.39■□□□□ 0.37
GCOM1-206ENST00000471563 DIS3L2Q8IYB7 885 aaKnown RBP17.39■□□□□ 0.37
GCOM1-206ENST00000471563 OXER1Q8TDS5 423 aa17.39■□□□□ 0.37
GCOM1-206ENST00000471563 XPO4Q9C0E2 1151 aaKnown RBP17.39■□□□□ 0.37
GCOM1-206ENST00000471563 RBM28Q9NW13 759 aaKnown RBP17.39■□□□□ 0.37
GCOM1-206ENST00000471563 SMC2O95347 1197 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 TUBB4AP04350 444 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 STK38Q15208 465 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 TMC6Q7Z403 805 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 ZFPM1Q8IX07 1006 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 POLR3EQ9NVU0 708 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 IFNKQ9P0W0 207 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
GCOM1-206ENST00000471563 CNTNAP5Q8WYK1 1306 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 SFPQP23246 707 aaKnown RBP eCLIP17.38■□□□□ 0.37
GCOM1-206ENST00000471563 RBM5P52756 815 aaKnown RBP eCLIP17.38■□□□□ 0.37
GCOM1-206ENST00000471563 TPM4P67936 248 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 AKAP17AQ02040 695 aaKnown RBP17.38■□□□□ 0.37
GCOM1-206ENST00000471563 ANO1Q5XXA6 986 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 RGS22Q8NE09 1264 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 TMEM47Q9BQJ4 181 aa17.38■□□□□ 0.37
GCOM1-206ENST00000471563 PRPF3O43395 683 aaKnown RBP17.37■□□□□ 0.37
GCOM1-206ENST00000471563 NLRP12P59046 1061 aa17.37■□□□□ 0.37
GCOM1-206ENST00000471563 SF3A1Q15459 793 aaKnown RBP17.37■□□□□ 0.37
GCOM1-206ENST00000471563 TCP11L1Q9NUJ3 509 aa17.37■□□□□ 0.37
GCOM1-206ENST00000471563 NRDCO43847 1150 aa17.37■□□□□ 0.37
GCOM1-206ENST00000471563 H2AFXP16104 143 aaPredicted RBP17.37■□□□□ 0.37
GCOM1-206ENST00000471563 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
GCOM1-206ENST00000471563 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
GCOM1-206ENST00000471563 ANKS1AQ92625 1134 aa17.37■□□□□ 0.37
GCOM1-206ENST00000471563 ZDHHC15Q96MV8 337 aa17.37■□□□□ 0.37
GCOM1-206ENST00000471563 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
GCOM1-206ENST00000471563 FOCADQ5VW36 1801 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 SPTLC2O15270 562 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 MARCKSP29966 332 aaPredicted RBP17.36■□□□□ 0.37
GCOM1-206ENST00000471563 FAM193AP78312 1265 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 GABPAQ06546 454 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 TCP10Q12799 353 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 CEP95Q96GE4 821 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 ZNF287Q9HBT7 754 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 ZNF446Q9NWS9 450 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 CC2D2BQ6DHV5 1058 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 CLEC10AQ8IUN9 316 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
GCOM1-206ENST00000471563 GOLGA8HP0CJ92 632 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 TOB1P50616 345 aaPredicted RBP17.35■□□□□ 0.37
GCOM1-206ENST00000471563 NCAPHQ15003 741 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 SLC35G1Q2M3R5 365 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 SYT10Q6XYQ8 523 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 MAP3K14Q99558 947 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 MAD2L2Q9UI95 211 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 ZNF646O15015 1829 aaPredicted RBP17.35■□□□□ 0.37
GCOM1-206ENST00000471563 MYH6P13533 1939 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 FAM205CA6NFA0 338 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 SAFBQ15424 915 aaKnown RBP eCLIP17.35■□□□□ 0.37
GCOM1-206ENST00000471563 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
GCOM1-206ENST00000471563 COL4A5P29400 1685 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 IKBKBO14920 756 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 CCP110O43303 1012 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 AKR1B1P15121 316 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 FKBP1AP62942 108 aaKnown RBP17.34■□□□□ 0.37
GCOM1-206ENST00000471563 PTPAQ15257 358 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 EARS2Q5JPH6 523 aaKnown RBP17.34■□□□□ 0.37
GCOM1-206ENST00000471563 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 PHF20Q9BVI0 1012 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
GCOM1-206ENST00000471563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.37
GCOM1-206ENST00000471563 FAM196BA6NMK8 535 aa17.33■□□□□ 0.37
GCOM1-206ENST00000471563 ADAMTS3O15072 1205 aa17.33■□□□□ 0.37
GCOM1-206ENST00000471563 RAD17O75943 681 aa17.33■□□□□ 0.37
GCOM1-206ENST00000471563 ZNF202O95125 648 aa17.33■□□□□ 0.37
GCOM1-206ENST00000471563 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.37
GCOM1-206ENST00000471563 BMS1Q14692 1282 aaKnown RBP17.33■□□□□ 0.37
GCOM1-206ENST00000471563 GRM4Q14833 912 aa17.33■□□□□ 0.37
GCOM1-206ENST00000471563 SLC39A14Q15043 492 aa17.33■□□□□ 0.37
GCOM1-206ENST00000471563 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.37
GCOM1-206ENST00000471563 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.37
GCOM1-206ENST00000471563 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.37
GCOM1-206ENST00000471563 KIF5BP33176 963 aa17.33■□□□□ 0.36
GCOM1-206ENST00000471563 NPY5RQ15761 445 aa17.33■□□□□ 0.36
GCOM1-206ENST00000471563 ERCC6LQ2NKX8 1250 aa17.33■□□□□ 0.36
GCOM1-206ENST00000471563 PPP1R1BQ9UD71 204 aaPredicted RBP17.33■□□□□ 0.36
GCOM1-206ENST00000471563 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms