RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GPRC5DQ9NZD1 345 aa10.82□□□□□ -0.68
VPS52-216ENST00000471309 KCNJ14Q9UNX9 436 aa10.82□□□□□ -0.68
VPS52-216ENST00000471309 hCG_1642624A0A1W2PR95 340 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 BTBD18B2RXH4 712 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 GH2P01242 217 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 GOLGA8HP0CJ92 632 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 CALML3P27482 149 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 RASA3Q14644 834 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
VPS52-216ENST00000471309 NPY5RQ15761 445 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 SHROOM1Q2M3G4 852 aaPredicted RBP10.81□□□□□ -0.68
VPS52-216ENST00000471309 RILPL1Q5EBL4 403 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 ANO1Q5XXA6 986 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 APOBEC3FQ8IUX4 373 aaKnown RBP10.81□□□□□ -0.68
VPS52-216ENST00000471309 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 CCDC148Q8NFR7 591 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 KCNG4Q8TDN1 519 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 RRP36Q96EU6 259 aaKnown RBP10.81□□□□□ -0.68
VPS52-216ENST00000471309 FTOQ9C0B1 505 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS52-216ENST00000471309 GZF1Q9H116 711 aaPredicted RBP10.81□□□□□ -0.68
VPS52-216ENST00000471309 RIOX1Q9H6W3 641 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 HACL1Q9UJ83 578 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 ZBTB21Q9ULJ3 1066 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 MTMR7Q9Y216 660 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 FRMPD2Q68DX3 1309 aaPredicted RBP10.81□□□□□ -0.68
VPS52-216ENST00000471309 DOCK1Q14185 1865 aa10.81□□□□□ -0.68
VPS52-216ENST00000471309 GOLGA6L4A6NEF3 574 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 JAG1P78504 1218 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 ATP2B2Q01814 1243 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 CEBPZQ03701 1054 aaKnown RBP10.8□□□□□ -0.68
VPS52-216ENST00000471309 STK38Q15208 465 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 WWC2Q6AWC2 1192 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 GALNT17Q6IS24 598 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 SIAH1Q8IUQ4 282 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 DAGLBQ8NCG7 672 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 LINC00301Q8NCQ3 95 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 OXER1Q8TDS5 423 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 CCDC12Q8WUD4 166 aaPredicted RBP10.8□□□□□ -0.68
VPS52-216ENST00000471309 TNFRSF25Q93038 417 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 GMCL1Q96IK5 515 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 ARHGEF10LQ9HCE6 1279 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 GINM1Q9NU53 330 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 BARHL2Q9NY43 387 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 RNF181Q9P0P0 153 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 TMEM63CQ9P1W3 806 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 SEC63Q9UGP8 760 aaKnown RBP10.8□□□□□ -0.68
VPS52-216ENST00000471309 ISY1Q9ULR0 285 aaKnown RBP10.8□□□□□ -0.68
VPS52-216ENST00000471309 PPP2R3BQ9Y5P8 575 aa10.8□□□□□ -0.68
VPS52-216ENST00000471309 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 STXBP3O00186 592 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 CAP2P40123 477 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 NLRP5P59047 1200 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 ZNF445P59923 1031 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 NR5A1Q13285 461 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 SLC39A14Q15043 492 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 CCDC96Q2M329 555 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 ZSCAN23Q3MJ62 389 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 CCDC183Q5T5S1 534 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 SLFN13Q68D06 897 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 PPP1R18Q6NYC8 613 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 HEATR3Q7Z4Q2 680 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 TRPM4Q8TD43 1214 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 GPKOWQ92917 476 aaPredicted RBP eCLIP10.79□□□□□ -0.68
VPS52-216ENST00000471309 HOOK2Q96ED9 719 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 PGBD1Q96JS3 809 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 SH2D4AQ9H788 454 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 CLIC4Q9Y696 253 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 MORC2Q9Y6X9 1032 aaPredicted RBP10.79□□□□□ -0.68
VPS52-216ENST00000471309 ASTN2O75129 1339 aaPredicted RBP10.79□□□□□ -0.68
VPS52-216ENST00000471309 PITPNM2Q9BZ72 1349 aa10.79□□□□□ -0.68
VPS52-216ENST00000471309 ZC3H4Q9UPT8 1303 aaKnown RBP10.79□□□□□ -0.68
VPS52-216ENST00000471309 ESYT2A0FGR8 921 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 F5H6K3 240 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 SPTLC2O15270 562 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 PPP6R2O75170 966 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 NDUFB10O96000 172 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 ASNSP08243 561 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 SLC1A4P43007 532 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 ME1P48163 572 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 KLRC3Q07444 240 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 PTPAQ15257 358 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 SF3A1Q15459 793 aaKnown RBP10.78□□□□□ -0.68
VPS52-216ENST00000471309 ANGEL2Q5VTE6 544 aaKnown RBP10.78□□□□□ -0.68
VPS52-216ENST00000471309 TYW1BQ6NUM6 668 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 JMYQ8N9B5 988 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 BICD2Q8TD16 824 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 PIBF1Q8WXW3 757 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 MTMR8Q96EF0 704 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 PIGSQ96S52 555 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 DEFB129Q9H1M3 183 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 CPVLQ9H3G5 476 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 GPCPD1Q9NPB8 672 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 NOL7Q9UMY1 257 aaKnown RBP10.78□□□□□ -0.68
VPS52-216ENST00000471309 PCDHA4Q9UN74 947 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 TMX2Q9Y320 296 aa10.78□□□□□ -0.68
VPS52-216ENST00000471309 PAPPA2Q9BXP8 1791 aa10.77□□□□□ -0.68
VPS52-216ENST00000471309 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 A0A1W2PQ27 194 aa10.77□□□□□ -0.69
VPS52-216ENST00000471309 A0A1W2PQ64 194 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms