RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 AFMP43652 599 aa8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 GJA8P48165 433 aa8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 SOX9P48436 509 aa8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 CEBPAP49715 358 aaPredicted RBP8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 LSRQ86X29 649 aaPredicted RBP8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 TCTN2Q96GX1 697 aa8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 KCNK12Q9HB15 430 aa8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 CTSKP43235 329 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 RNF4P78317 190 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 ZNF648Q5T619 568 aaPredicted RBP8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 TAB3Q8N5C8 712 aaPredicted RBP8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 DAGLBQ8NCG7 672 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 ENOX1Q8TC92 643 aaKnown RBP8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 LINC01599Q8WXQ3 324 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 KIRREL1Q96J84 757 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 ACBD3Q9H3P7 528 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 C19orf44Q9H6X5 657 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 SUCOQ9UBS9 1254 aaKnown RBP8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 EFR3BQ9Y2G0 817 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 LTBP3Q9NS15 1303 aa8.51□□□□□ -1.05
PRPF40A-206ENST00000471167 GLI1P08151 1106 aa8.5□□□□□ -1.05
PRPF40A-206ENST00000471167 LTKP29376 864 aa8.5□□□□□ -1.05
PRPF40A-206ENST00000471167 KCNMB1Q16558 191 aa8.5□□□□□ -1.05
PRPF40A-206ENST00000471167 BBS9Q3SYG4 887 aa8.5□□□□□ -1.05
PRPF40A-206ENST00000471167 ZPBP2Q6X784 338 aa8.5□□□□□ -1.05
PRPF40A-206ENST00000471167 UNC5AQ6ZN44 842 aa8.5□□□□□ -1.05
PRPF40A-206ENST00000471167 SIGLEC6O43699 453 aa8.49□□□□□ -1.05
PRPF40A-206ENST00000471167 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
PRPF40A-206ENST00000471167 PRR23BQ6ZRT6 265 aa8.49□□□□□ -1.05
PRPF40A-206ENST00000471167 GPRASP2Q96D09 838 aa8.49□□□□□ -1.05
PRPF40A-206ENST00000471167 SHISA4Q96DD7 197 aa8.49□□□□□ -1.05
PRPF40A-206ENST00000471167 FERD3LQ96RJ6 166 aa8.49□□□□□ -1.05
PRPF40A-206ENST00000471167 FOXP3Q9BZS1 431 aa8.49□□□□□ -1.05
PRPF40A-206ENST00000471167 C8AP07357 584 aa8.48□□□□□ -1.05
PRPF40A-206ENST00000471167 IMPDH2P12268 514 aa8.48□□□□□ -1.05
PRPF40A-206ENST00000471167 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
PRPF40A-206ENST00000471167 TM9SF2Q99805 663 aa8.48□□□□□ -1.05
PRPF40A-206ENST00000471167 GFOD1Q9NXC2 390 aa8.48□□□□□ -1.05
PRPF40A-206ENST00000471167 GIPRP48546 466 aa8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 PMS1P54277 932 aaKnown RBP8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 CLEC16AQ2KHT3 1053 aa8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 TDRD10Q5VZ19 366 aaKnown RBP8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 ZNF655Q8N720 491 aaPredicted RBP8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 MYLIPQ8WY64 445 aa8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 RNF32Q9H0A6 362 aa8.47□□□□□ -1.05
PRPF40A-206ENST00000471167 KRT1P04264 644 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 GUCY2CP25092 1073 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 FBXW10Q5XX13 1052 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 DCAF15Q66K64 600 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 PDZD8Q8NEN9 1154 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 ABHD4Q8TB40 342 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 SHDQ96IW2 340 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 KRTAP9-9Q9BYP9 154 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 KRTAP9-4Q9BYQ2 154 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 TGIF2Q9GZN2 237 aa8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 MKRN2Q9H000 416 aaKnown RBP8.46□□□□□ -1.06
PRPF40A-206ENST00000471167 LRRC10BA6NIK2 292 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 GALK1P51570 392 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 COL9A2Q14055 689 aaPredicted RBP8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 NR0B2Q15466 257 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 MLANAQ16655 118 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 C7orf61Q8IZ16 206 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 FAM169BQ8N8A8 192 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 CCDC120Q96HB5 630 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 CHST7Q9NS84 486 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 TCFL5Q9UL49 500 aa8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 ZNF214Q9UL59 606 aaPredicted RBP8.45□□□□□ -1.06
PRPF40A-206ENST00000471167 MEIS1O00470 390 aa8.44□□□□□ -1.06
PRPF40A-206ENST00000471167 PSPNO60542 156 aa8.44□□□□□ -1.06
PRPF40A-206ENST00000471167 NASPP49321 788 aaPredicted RBP8.44□□□□□ -1.06
PRPF40A-206ENST00000471167 ZNF124Q15973 351 aa8.44□□□□□ -1.06
PRPF40A-206ENST00000471167 CILP2Q8IUL8 1156 aa8.44□□□□□ -1.06
PRPF40A-206ENST00000471167 A0A1W2PQH9 124 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 TP53P04637 393 aaPredicted RBP8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 SYPP08247 313 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 RPL10P27635 214 aaKnown RBP8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 ZNF445P59923 1031 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 TMEM52Q8NDY8 209 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 HHIPL1Q96JK4 782 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 DHRS1Q96LJ7 313 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 FAM86C1Q9NVL1 165 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 CCDC9Q9Y3X0 531 aaKnown RBP8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 ZNF451Q9Y4E5 1061 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 PCDHB12Q9Y5F1 795 aa8.43□□□□□ -1.06
PRPF40A-206ENST00000471167 CBFA2T2O43439 604 aa8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 FKTNO75072 461 aa8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 CHMP4BP1P59074 171 aa8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 KIR3DS1Q14943 382 aa8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 WAPLQ7Z5K2 1190 aa8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 SRRTQ9BXP5 876 aaKnown RBP8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 FBXL21Q9UKT6 434 aa8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 PCDHB10Q9UN67 800 aa8.42□□□□□ -1.06
PRPF40A-206ENST00000471167 ZNF205O95201 554 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 VAV1P15498 845 aa8.41□□□□□ -1.06
PRPF40A-206ENST00000471167 EIF6P56537 245 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms