RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 FOSBP53539 338 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 JAG1P78504 1218 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 NTRK3Q16288 839 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 SRBD1Q8N5C6 995 aaKnown RBP11.29□□□□□ -0.6
CCM2-204ENST00000470837 C2orf69Q8N8R5 385 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 ZNF280CQ8ND82 737 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
CCM2-204ENST00000470837 CCDC12Q8WUD4 166 aaPredicted RBP11.29□□□□□ -0.6
CCM2-204ENST00000470837 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 PIBF1Q8WXW3 757 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 GBP4Q96PP9 640 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 WDR18Q9BV38 432 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 SPZ1Q9BXG8 430 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 KIAA1683Q9H0B3 1180 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 ZHX2Q9Y6X8 837 aa11.29□□□□□ -0.6
CCM2-204ENST00000470837 UNCXA6NJT0 531 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 TRIM75PA6NK02 468 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 C19orf81C9J6K1 198 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 GOLGA6L22H0YM25 854 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 ZSCAN22P10073 491 aaPredicted RBP11.28□□□□□ -0.6
CCM2-204ENST00000470837 ECE1P42892 770 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 FKBP1BP68106 108 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 TRAF1Q13077 416 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 SPP2Q13103 211 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 VGLL4Q14135 290 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
CCM2-204ENST00000470837 KCTD1Q719H9 257 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 SIAH1Q8IUQ4 282 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 RGS22Q8NE09 1264 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 ACER1Q8TDN7 264 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
CCM2-204ENST00000470837 UBA5Q9GZZ9 404 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
CCM2-204ENST00000470837 UTRNP46939 3433 aa11.28□□□□□ -0.6
CCM2-204ENST00000470837 A0A1W2PRG0 241 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 TMEM232C9JQI7 657 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 hCG_1984214I3L0E3 225 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 DTNBO60941 627 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 BRD1O95696 1058 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 SCG2P13521 617 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 FDPSP14324 419 aaKnown RBP11.27□□□□□ -0.61
CCM2-204ENST00000470837 STAT2P52630 851 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 BACE1P56817 501 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 MTMR2Q13614 643 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 HEATR3Q7Z4Q2 680 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 NBPF11Q86T75 865 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 FAM160B2Q86V87 743 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 ERO1BQ86YB8 467 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 ZNF713Q8N859 430 aaPredicted RBP11.27□□□□□ -0.61
CCM2-204ENST00000470837 CCDC148Q8NFR7 591 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 ZSCAN16Q9H4T2 348 aaPredicted RBP11.27□□□□□ -0.61
CCM2-204ENST00000470837 FEM1BQ9UK73 627 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 FZD1Q9UP38 647 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 CNTNAP5Q8WYK1 1306 aa11.27□□□□□ -0.61
CCM2-204ENST00000470837 SSC5DA1L4H1 1573 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 TRAF5O00463 557 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 CALML3P27482 149 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 NLRP5P59047 1200 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 PPATQ06203 517 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 PFKFB3Q16875 520 aaPredicted RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 FAM83BQ5T0W9 1011 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 SYDE2Q5VT97 1194 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 DLK2Q6UY11 383 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 CCDC84Q86UT8 332 aaPredicted RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 ADGRF4Q8IZF3 695 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 FAM177A1Q8N128 213 aaPredicted RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 FBXO18Q8NFZ0 1043 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 TANGO6Q9C0B7 1094 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 ELP3Q9H9T3 547 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 SH3GLB2Q9NR46 395 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.26□□□□□ -0.61
CCM2-204ENST00000470837 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 SNCAIPQ9Y6H5 919 aa11.26□□□□□ -0.61
CCM2-204ENST00000470837 SIPA1L1O43166 1804 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 PNMA6FA0A0J9YX94 578 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 F13A1P00488 732 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 SLC16A2P36021 539 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 NAPAP54920 295 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 FUT2Q10981 343 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 PKP1Q13835 747 aa11.25□□□□□ -0.61
CCM2-204ENST00000470837 KRT40Q6A162 431 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms