RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 ZYXQ15942 572 aaKnown RBP13.13□□□□□ -0.31
SREBF1-209ENST00000470247 RTN1Q16799 776 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 SPRYD7Q5W111 196 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 CCDC83Q8IWF9 413 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
SREBF1-209ENST00000470247 DCAF4Q8WV16 495 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 SH2D4AQ9H788 454 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
SREBF1-209ENST00000470247 A0A0G2JLL6 359 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-209ENST00000470247 CYTH3O43739 400 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 PARP1P09874 1014 aaKnown RBP13.12□□□□□ -0.31
SREBF1-209ENST00000470247 USP14P54578 494 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 BTNL9Q6UXG8 535 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 PRRT2Q7Z6L0 340 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-209ENST00000470247 RASAL3Q86YV0 1011 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 CMTR1Q8N1G2 835 aaKnown RBP13.12□□□□□ -0.31
SREBF1-209ENST00000470247 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
SREBF1-209ENST00000470247 LPAR1Q92633 364 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 FEZ1Q99689 392 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
SREBF1-209ENST00000470247 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
SREBF1-209ENST00000470247 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-209ENST00000470247 KLRF2D3W0D1 207 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 PLA2G6O60733 806 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 BMP3P12645 472 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 IFNAR1P17181 557 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 VCAM1P19320 739 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 SLC1A4P43007 532 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 APLP1P51693 650 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 ASPRV1Q53RT3 343 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 FAM83BQ5T0W9 1011 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 CTCFLQ8NI51 663 aaPredicted RBP13.11□□□□□ -0.31
SREBF1-209ENST00000470247 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 HHIPL1Q96JK4 782 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 RIOX1Q9H6W3 641 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
SREBF1-209ENST00000470247 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
SREBF1-209ENST00000470247 BAZ2BQ9UIF8 2168 aaKnown RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 RAD21O60216 631 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 JAK2O60674 1132 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 ZBTB48P10074 688 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 KIF5BP33176 963 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 GNAQP50148 359 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 ZNF157P51786 506 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 BECN1Q14457 450 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 MTMR8Q96EF0 704 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 INTS4Q96HW7 963 aaKnown RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 LLPHQ9BRT6 129 aaKnown RBP13.1□□□□□ -0.31
SREBF1-209ENST00000470247 FBXO28Q9NVF7 368 aa13.1□□□□□ -0.31
SREBF1-209ENST00000470247 PTPRFP10586 1907 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 TESPA1A2RU30 521 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-209ENST00000470247 TMEM232C9JQI7 657 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 SLC10A3P09131 477 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 SLC16A2P36021 539 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
SREBF1-209ENST00000470247 SNAPC2Q13487 334 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 CCDC96Q2M329 555 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 TREML2Q5T2D2 321 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-209ENST00000470247 BRI3BPQ8WY22 251 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 SPZ1Q9BXG8 430 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 RPAP3Q9H6T3 665 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-209ENST00000470247 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 CNTNAP5Q8WYK1 1306 aa13.09□□□□□ -0.31
SREBF1-209ENST00000470247 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 PRPF3O43395 683 aaKnown RBP13.08□□□□□ -0.32
SREBF1-209ENST00000470247 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
SREBF1-209ENST00000470247 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-209ENST00000470247 HOXA7P31268 230 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-209ENST00000470247 GTF2A2P52657 109 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 PKN1Q16512 942 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 ADGRF4Q8IZF3 695 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 PHKBQ93100 1093 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.32
SREBF1-209ENST00000470247 ZIC5Q96T25 663 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 PTPN18Q99952 460 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 JMJD4Q9H9V9 463 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 FOXD4L1Q9NU39 408 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
SREBF1-209ENST00000470247 ABT1Q9ULW3 272 aaKnown RBP13.08□□□□□ -0.32
SREBF1-209ENST00000470247 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-209ENST00000470247 PTPDC1A2A3K4 754 aa13.07□□□□□ -0.32
SREBF1-209ENST00000470247 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms