RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 PDHXO00330 501 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 SNHG28P0DPA3 235 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 RXRAP19793 462 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 APOBRQ0VD83 1088 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 ZNF654Q8IZM8 581 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 LPAR1Q92633 364 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 GMCL1Q96IK5 515 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 FBXO28Q9NVF7 368 aa17.32■□□□□ 0.36
COL9A3-209ENST00000469852 WDR46O15213 610 aaKnown RBP17.31■□□□□ 0.36
COL9A3-209ENST00000469852 GOLGA8HP0CJ92 632 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 CYP2C8P10632 490 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 NEK4P51957 841 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 AK2P54819 239 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 INHBEP58166 350 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 TROAPQ12815 778 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 POTEEQ6S8J3 1075 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 NFXL1Q6ZNB6 911 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 FBXL16Q8N461 479 aa17.31■□□□□ 0.36
COL9A3-209ENST00000469852 KLF18A0A0U1RQI7 1052 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 CCDC69A6NI79 296 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 BMP3P12645 472 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 HOXA7P31268 230 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-209ENST00000469852 SLC1A4P43007 532 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 FGD1P98174 961 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 TTBK2Q6IQ55 1244 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 APOA5Q6Q788 366 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 DCAF4Q8WV16 495 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 BEGAINQ9BUH8 593 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 TANGO6Q9C0B7 1094 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
COL9A3-209ENST00000469852 CPVLQ9H3G5 476 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 R3HDMLQ9H3Y0 253 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 GPCPD1Q9NPB8 672 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 TSKSQ9UJT2 592 aa17.3■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 PEX10O60683 326 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 ZNF543Q08ER8 600 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 CCDC96Q2M329 555 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 NOL8Q76FK4 1167 aaKnown RBP17.29■□□□□ 0.36
COL9A3-209ENST00000469852 CATIPQ7Z7H3 387 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 TMTC2Q8N394 836 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 NUP133Q8WUM0 1156 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
COL9A3-209ENST00000469852 ALDH8A1Q9H2A2 487 aaPredicted RBP17.29■□□□□ 0.36
COL9A3-209ENST00000469852 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
COL9A3-209ENST00000469852 SLC45A1Q9Y2W3 748 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 A0A0G2JMZ2 1700 aa17.29■□□□□ 0.36
COL9A3-209ENST00000469852 COL11A1P12107 1806 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-209ENST00000469852 TMEM232C9JQI7 657 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 DDAH1O94760 285 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 CD2BP2O95400 341 aaKnown RBP17.28■□□□□ 0.36
COL9A3-209ENST00000469852 SLC16A2P36021 539 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 GRM4Q14833 912 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 RABEP1Q15276 862 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 TAF1CQ15572 869 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-209ENST00000469852 SLC35G1Q2M3R5 365 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
COL9A3-209ENST00000469852 MICU3Q86XE3 530 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 RNF186Q9NXI6 227 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 HPS5Q9UPZ3 1129 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 SLC12A7Q9Y666 1083 aa17.28■□□□□ 0.36
COL9A3-209ENST00000469852 ADGRA2Q96PE1 1338 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 SPDYE16A6NNV3 312 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-209ENST00000469852 FLOT1O75955 427 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 LARGE1O95461 756 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 EVCP57679 992 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 IRX3P78415 501 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-209ENST00000469852 CRHR2Q13324 411 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 NBPF11Q86T75 865 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-209ENST00000469852 ATG4CQ96DT6 458 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 UBA5Q9GZZ9 404 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.36
COL9A3-209ENST00000469852 NAP1L2Q9ULW6 460 aaPredicted RBP17.27■□□□□ 0.36
COL9A3-209ENST00000469852 PALM3A6NDB9 673 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-209ENST00000469852 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
COL9A3-209ENST00000469852 ZBTB43O43298 467 aa17.26■□□□□ 0.35
COL9A3-209ENST00000469852 TRPA1O75762 1119 aa17.26■□□□□ 0.35
COL9A3-209ENST00000469852 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
COL9A3-209ENST00000469852 OSBPP22059 807 aa17.26■□□□□ 0.35
COL9A3-209ENST00000469852 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
COL9A3-209ENST00000469852 DSG3P32926 999 aa17.26■□□□□ 0.35
COL9A3-209ENST00000469852 HERVK_113P62684 666 aa17.26■□□□□ 0.35
COL9A3-209ENST00000469852 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL9A3-209ENST00000469852 ZCCHC17Q9NP64 241 aaKnown RBP17.26■□□□□ 0.35
COL9A3-209ENST00000469852 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms