RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 ZHX2Q9Y6X8 837 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 STK36Q9NRP7 1315 aa12.1□□□□□ -0.47
THBS3-206ENST00000469769 CXCL11O14625 94 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 CDKL5O76039 1030 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 CELF2O95319 508 aaKnown RBP12.09□□□□□ -0.47
THBS3-206ENST00000469769 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
THBS3-206ENST00000469769 FDPSP14324 419 aaKnown RBP12.09□□□□□ -0.47
THBS3-206ENST00000469769 SPP2Q13103 211 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 CPLX2Q6PUV4 134 aaKnown RBP12.09□□□□□ -0.47
THBS3-206ENST00000469769 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 CCDC84Q86UT8 332 aaPredicted RBP12.09□□□□□ -0.47
THBS3-206ENST00000469769 SRBD1Q8N5C6 995 aaKnown RBP12.09□□□□□ -0.47
THBS3-206ENST00000469769 C2orf69Q8N8R5 385 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 SMC1BQ8NDV3 1235 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 RNF26Q9BY78 433 aaPredicted RBP12.09□□□□□ -0.47
THBS3-206ENST00000469769 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
THBS3-206ENST00000469769 MYH6P13533 1939 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 RLFQ13129 1914 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 PTPDC1A2A3K4 754 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 KLRF2D3W0D1 207 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 CYTH3O43739 400 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 JAK2O60674 1132 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
THBS3-206ENST00000469769 PDIA4P13667 645 aaKnown RBP12.08□□□□□ -0.48
THBS3-206ENST00000469769 USP14P54578 494 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 FSTL1Q12841 308 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 PPIL2Q13356 520 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 PRKG1Q13976 671 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 RAB11FIP4Q86YS3 637 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 CNTNAP5Q8WYK1 1306 aa12.08□□□□□ -0.48
THBS3-206ENST00000469769 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
THBS3-206ENST00000469769 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
THBS3-206ENST00000469769 CPLX1O14810 134 aa12.07□□□□□ -0.48
THBS3-206ENST00000469769 WDR46O15213 610 aaKnown RBP12.07□□□□□ -0.48
THBS3-206ENST00000469769 PRPF3O43395 683 aaKnown RBP12.07□□□□□ -0.48
THBS3-206ENST00000469769 BMP3P12645 472 aa12.07□□□□□ -0.48
THBS3-206ENST00000469769 SLC1A4P43007 532 aa12.07□□□□□ -0.48
THBS3-206ENST00000469769 ATP2B2Q01814 1243 aa12.07□□□□□ -0.48
THBS3-206ENST00000469769 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
THBS3-206ENST00000469769 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
THBS3-206ENST00000469769 NAP1L2Q9ULW6 460 aaPredicted RBP12.07□□□□□ -0.48
THBS3-206ENST00000469769 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
THBS3-206ENST00000469769 A0A0G2JLL6 359 aaPredicted RBP12.06□□□□□ -0.48
THBS3-206ENST00000469769 IRF6O14896 467 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 GJB2P29033 226 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 GJA5P36382 358 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 MTMR2Q13614 643 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 MOGSQ13724 837 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 TTLL12Q14166 644 aaPredicted RBP12.06□□□□□ -0.48
THBS3-206ENST00000469769 PKN1Q16512 942 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 PRRT2Q7Z6L0 340 aaPredicted RBP12.06□□□□□ -0.48
THBS3-206ENST00000469769 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 FAM177A1Q8N128 213 aaPredicted RBP12.06□□□□□ -0.48
THBS3-206ENST00000469769 CNKSR2Q8WXI2 1034 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 SLC10A4Q96EP9 437 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 HHIPL1Q96JK4 782 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 ELP3Q9H9T3 547 aa12.06□□□□□ -0.48
THBS3-206ENST00000469769 DAXXQ9UER7 740 aaPredicted RBP12.06□□□□□ -0.48
THBS3-206ENST00000469769 DEXIO95424 95 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 HSP90AA1P07900 732 aaKnown RBP12.05□□□□□ -0.48
THBS3-206ENST00000469769 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 VCAM1P19320 739 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 HOXA7P31268 230 aaPredicted RBP12.05□□□□□ -0.48
THBS3-206ENST00000469769 SSRP1Q08945 709 aaKnown RBP12.05□□□□□ -0.48
THBS3-206ENST00000469769 TTBK2Q6IQ55 1244 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 KCTD1Q719H9 257 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 FAM160B2Q86V87 743 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 CMTR1Q8N1G2 835 aaKnown RBP12.05□□□□□ -0.48
THBS3-206ENST00000469769 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
THBS3-206ENST00000469769 CHURC1Q8WUH1 139 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 PHKBQ93100 1093 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 OPTNQ96CV9 577 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 FEZ1Q99689 392 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 ZNF408Q9H9D4 720 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 ORC3Q9UBD5 711 aaPredicted RBP12.05□□□□□ -0.48
THBS3-206ENST00000469769 TLL2Q9Y6L7 1015 aa12.05□□□□□ -0.48
THBS3-206ENST00000469769 TRIM75PA6NK02 468 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 ZBTB48P10074 688 aaPredicted RBP12.04□□□□□ -0.48
THBS3-206ENST00000469769 PDCP20941 246 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 STAT2P52630 851 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 HMGCS2P54868 508 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 PFKFB3Q16875 520 aaPredicted RBP12.04□□□□□ -0.48
THBS3-206ENST00000469769 TRIM22Q8IYM9 498 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 ADGRF4Q8IZF3 695 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 WNK4Q96J92 1243 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 MS4A4AQ96JQ5 239 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
THBS3-206ENST00000469769 SLC26A6Q9BXS9 759 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 UBA5Q9GZZ9 404 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 JMJD4Q9H9V9 463 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
THBS3-206ENST00000469769 ADAMTS5Q9UNA0 930 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms