RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 POLR3KQ9Y2Y1 108 aaPredicted RBP8.55□□□□□ -1.04
PTCD3-208ENST00000469585 CSADQ9Y600 493 aa8.55□□□□□ -1.04
PTCD3-208ENST00000469585 ACTL7BQ9Y614 415 aa8.55□□□□□ -1.04
PTCD3-208ENST00000469585 TRPM1Q7Z4N2 1603 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 DISP3Q9P2K9 1392 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 PLEKHH1Q9ULM0 1364 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 NTF4P34130 210 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 CWF19L2Q2TBE0 894 aaKnown RBP8.54□□□□□ -1.04
PTCD3-208ENST00000469585 SEZ6Q53EL9 994 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 DIEXFQ68CQ4 756 aaKnown RBP8.54□□□□□ -1.04
PTCD3-208ENST00000469585 DYMQ7RTS9 669 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 SPATA32Q96LK8 384 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 CDK19Q9BWU1 502 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 TACC3Q9Y6A5 838 aa8.54□□□□□ -1.04
PTCD3-208ENST00000469585 ADGRB2O60241 1585 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 ATF4P18848 351 aaPredicted RBP8.53□□□□□ -1.04
PTCD3-208ENST00000469585 TMF1P82094 1093 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 GNL2Q13823 731 aaKnown RBP8.53□□□□□ -1.04
PTCD3-208ENST00000469585 UVSSAQ2YD98 709 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 PPM1JQ5JR12 505 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 RNF214Q8ND24 703 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 ORAI2Q96SN7 254 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 GMLQ99445 158 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 BRMS1Q9HCU9 246 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 GINM1Q9NU53 330 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 ITSN1Q15811 1721 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 ARHGEF28Q8N1W1 1705 aaKnown RBP8.53□□□□□ -1.04
PTCD3-208ENST00000469585 AHDC1Q5TGY3 1603 aaPredicted RBP8.53□□□□□ -1.04
PTCD3-208ENST00000469585 TULP4Q9NRJ4 1543 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 PRR36Q9H6K5 1346 aa8.53□□□□□ -1.04
PTCD3-208ENST00000469585 FMN2Q9NZ56 1722 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 ARHGEF10O15013 1369 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 GDF11O95390 407 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 NEFMP07197 916 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 SOX9P48436 509 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 ZBTB37Q5TC79 503 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.52□□□□□ -1.05
PTCD3-208ENST00000469585 KRT28Q7Z3Y7 464 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 ARMC10Q8N2F6 343 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 QRICH2Q9H0J4 1663 aa8.52□□□□□ -1.05
PTCD3-208ENST00000469585 PRAMEF27A3QJZ7 478 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 FANCGO15287 622 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 SART1O43290 800 aaKnown RBP8.51□□□□□ -1.05
PTCD3-208ENST00000469585 ASPAP45381 313 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 COL9A2Q14055 689 aaPredicted RBP8.51□□□□□ -1.05
PTCD3-208ENST00000469585 TTLL4Q14679 1199 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 PLA2G4EQ3MJ16 856 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 HDGFL2Q7Z4V5 671 aaPredicted RBP8.51□□□□□ -1.05
PTCD3-208ENST00000469585 REXO1Q8N1G1 1221 aaKnown RBP8.51□□□□□ -1.05
PTCD3-208ENST00000469585 PMFBP1Q8TBY8 1022 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 SEC16BQ96JE7 1060 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 WNT10AQ9GZT5 417 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 EFR3BQ9Y2G0 817 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 CORINQ9Y5Q5 1042 aa8.51□□□□□ -1.05
PTCD3-208ENST00000469585 USP47Q96K76 1375 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 GRIN3BO60391 1043 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 ATE1O95260 518 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 GATA4P43694 442 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 NBPF8Q3BBV2 869 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 ZNF772Q68DY9 489 aaPredicted RBP8.5□□□□□ -1.05
PTCD3-208ENST00000469585 CDPF1Q6NVV7 123 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 TMEM151AQ8N4L1 468 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 MYRFLQ96LU7 910 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 ACSS3Q9H6R3 686 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 EHMT1Q9H9B1 1298 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 TERF2IPQ9NYB0 399 aa8.5□□□□□ -1.05
PTCD3-208ENST00000469585 SBNO2Q9Y2G9 1366 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 PPIP5K1Q6PFW1 1433 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.49□□□□□ -1.05
PTCD3-208ENST00000469585 HCLS1P14317 486 aaPredicted RBP8.49□□□□□ -1.05
PTCD3-208ENST00000469585 GRK4P32298 578 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 MCM4P33991 863 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 NASPP49321 788 aaPredicted RBP8.49□□□□□ -1.05
PTCD3-208ENST00000469585 ZNF165P49910 485 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 ARID5AQ03989 594 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 CLCQ05315 142 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 SGO2Q562F6 1265 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 VPS37DQ86XT2 251 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 UTP4Q969X6 686 aaKnown RBP8.49□□□□□ -1.05
PTCD3-208ENST00000469585 ISL2Q96A47 359 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 PCDHB14Q9Y5E9 798 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
PTCD3-208ENST00000469585 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
PTCD3-208ENST00000469585 NINLQ9Y2I6 1382 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 GAS2O43903 313 aaKnown RBP8.48□□□□□ -1.05
PTCD3-208ENST00000469585 FGRP09769 529 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 PDE4BQ07343 736 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 GK5Q6ZS86 529 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 EZH1Q92800 747 aaPredicted RBP8.48□□□□□ -1.05
PTCD3-208ENST00000469585 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 PIDD1Q9HB75 910 aa8.48□□□□□ -1.05
PTCD3-208ENST00000469585 COL16A1Q07092 1604 aaPredicted RBP8.47□□□□□ -1.05
PTCD3-208ENST00000469585 TNS3Q68CZ2 1445 aa8.47□□□□□ -1.05
PTCD3-208ENST00000469585 SHPRHQ149N8 1683 aa8.47□□□□□ -1.05
PTCD3-208ENST00000469585 HTR3BO95264 441 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms