RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 BTBD7Q9P203 1132 aa14.23□□□□□ -0.13
CTNS-205ENST00000467663 RBM8AQ9Y5S9 174 aaKnown RBP14.23□□□□□ -0.13
CTNS-205ENST00000467663 EEF2P13639 858 aaKnown RBP14.22□□□□□ -0.13
CTNS-205ENST00000467663 CYP2B6P20813 491 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 RASA1P20936 1047 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 PSMA5P28066 241 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 MCM2P49736 904 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 PTH1RQ03431 593 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 TRMT44Q8IYL2 757 aaKnown RBP14.22□□□□□ -0.13
CTNS-205ENST00000467663 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 TRIB2Q92519 343 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 SNX21Q969T3 373 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 PLXNB2O15031 1838 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 LAMA4Q16363 1823 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 BRCA2P51587 3418 aa14.22□□□□□ -0.13
CTNS-205ENST00000467663 RPTORQ8N122 1335 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 ST18O60284 1047 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 APPP05067 770 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 DSG3P32926 999 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 TDO2P48775 406 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 NT5C2P49902 561 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 TRIM32Q13049 653 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 MAP3K21Q5TCX8 1036 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 IPO9Q96P70 1041 aaKnown RBP14.21□□□□□ -0.13
CTNS-205ENST00000467663 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 KIF2CQ99661 725 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 TANGO6Q9C0B7 1094 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTNS-205ENST00000467663 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.13
CTNS-205ENST00000467663 SLC15A5A6NIM6 579 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 WDR46O15213 610 aaKnown RBP14.2□□□□□ -0.14
CTNS-205ENST00000467663 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
CTNS-205ENST00000467663 PTPREP23469 700 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 RGS2P41220 211 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 MAP2K5Q13163 448 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 IMMTQ16891 758 aaKnown RBP14.2□□□□□ -0.14
CTNS-205ENST00000467663 CREB3L3Q68CJ9 461 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 SPICE1Q8N0Z3 855 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 MB21D1Q8N884 522 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 APBA2Q99767 749 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 ZNF287Q9HBT7 754 aa14.2□□□□□ -0.14
CTNS-205ENST00000467663 HMX1Q9NP08 348 aaPredicted RBP14.2□□□□□ -0.14
CTNS-205ENST00000467663 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
CTNS-205ENST00000467663 MKI67P46013 3256 aaKnown RBP14.19□□□□□ -0.14
CTNS-205ENST00000467663 FLOT1O75955 427 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 TFRCP02786 760 aaKnown RBP14.19□□□□□ -0.14
CTNS-205ENST00000467663 ATP2B2Q01814 1243 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 CCDC129Q6ZRS4 1044 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 SHCBP1Q8NEM2 672 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 MOV10L1Q9BXT6 1211 aaKnown RBP14.19□□□□□ -0.14
CTNS-205ENST00000467663 SPATC1LQ9H0A9 340 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 CWC22Q9HCG8 908 aaKnown RBP14.19□□□□□ -0.14
CTNS-205ENST00000467663 GOPCQ9HD26 462 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 NYAP2Q9P242 653 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 ADAMTS5Q9UNA0 930 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 SNX14Q9Y5W7 946 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 MYH8P13535 1937 aa14.19□□□□□ -0.14
CTNS-205ENST00000467663 GREB1LQ9C091 1923 aaPredicted RBP14.18□□□□□ -0.14
CTNS-205ENST00000467663 IGKV6D-41A0A0C4DH26 115 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 SLC27A2O14975 620 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 FOXP2O15409 715 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 FARP2O94887 1054 aaPredicted RBP14.18□□□□□ -0.14
CTNS-205ENST00000467663 HOXC6P09630 235 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
CTNS-205ENST00000467663 GRB14Q14449 540 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 CCL14Q16627 93 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 ZNF444Q8N0Y2 327 aaPredicted RBP14.18□□□□□ -0.14
CTNS-205ENST00000467663 STK11IPQ8N1F8 1099 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 ATG4CQ96DT6 458 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 NAPBQ9H115 298 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 IVNS1ABPQ9Y6Y0 642 aa14.18□□□□□ -0.14
CTNS-205ENST00000467663 RLFQ13129 1914 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 ZNF213O14771 459 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 STRNO43815 780 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 FGAP02671 866 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 PRKAR2AP13861 404 aaKnown RBP14.17□□□□□ -0.14
CTNS-205ENST00000467663 PPARAQ07869 468 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 CACNB2Q08289 660 aaPredicted RBP14.17□□□□□ -0.14
CTNS-205ENST00000467663 WDR78Q5VTH9 848 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 ANKLE1Q8NAG6 615 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 MKL1Q969V6 931 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 HTATIP2Q9BUP3 242 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 A0A0G2JMZ2 1700 aa14.17□□□□□ -0.14
CTNS-205ENST00000467663 F5H6K3 240 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 PRDM1O75626 825 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 IGHA2P01877 340 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 SLC3A2P08195 630 aaKnown RBP14.16□□□□□ -0.14
CTNS-205ENST00000467663 ERCC3P19447 782 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 PDE4BQ07343 736 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 KLRC3Q07444 240 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 NEDD1Q8NHV4 660 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 ALDH8A1Q9H2A2 487 aaPredicted RBP14.16□□□□□ -0.14
CTNS-205ENST00000467663 MROH8Q9H579 483 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 FBXO28Q9NVF7 368 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 MTMR4Q9NYA4 1195 aa14.16□□□□□ -0.14
CTNS-205ENST00000467663 PPP1R9AQ9ULJ8 1098 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms