RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 TRIB2Q92519 343 aa21.56■■□□□ 1.04
CGREF1-208ENST00000467539 INCENPQ9NQS7 918 aa21.56■■□□□ 1.04
CGREF1-208ENST00000467539 RAD21O60216 631 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 HOXC6P09630 235 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 MFAP1P55081 439 aaKnown RBP21.55■■□□□ 1.04
CGREF1-208ENST00000467539 TRIM32Q13049 653 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 MAP3K21Q5TCX8 1036 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 WDR78Q5VTH9 848 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 ZNF589Q86UQ0 364 aaPredicted RBP21.55■■□□□ 1.04
CGREF1-208ENST00000467539 MROH8Q9H579 483 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 HMX1Q9NP08 348 aaPredicted RBP21.55■■□□□ 1.04
CGREF1-208ENST00000467539 FBXO28Q9NVF7 368 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 PPP1R9AQ9ULJ8 1098 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 IVNS1ABPQ9Y6Y0 642 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 PLXNB2O15031 1838 aa21.55■■□□□ 1.04
CGREF1-208ENST00000467539 HIP1O00291 1037 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 VWA5AO00534 786 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 NDUFB10O96000 172 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 TFRCP02786 760 aaKnown RBP21.54■■□□□ 1.04
CGREF1-208ENST00000467539 PDE4AP27815 886 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 GRB14Q14449 540 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 TMEM132BQ14DG7 1078 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 PPP4R3BQ5MIZ7 849 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 UBE2Q1Q7Z7E8 422 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 DEFB118Q96PH6 123 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 CRISPLD2Q9H0B8 497 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.54■■□□□ 1.04
CGREF1-208ENST00000467539 TACC3Q9Y6A5 838 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 RLFQ13129 1914 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 GREB1LQ9C091 1923 aaPredicted RBP21.54■■□□□ 1.04
CGREF1-208ENST00000467539 CCDC171Q6TFL3 1326 aa21.54■■□□□ 1.04
CGREF1-208ENST00000467539 MKI67P46013 3256 aaKnown RBP21.53■■□□□ 1.04
CGREF1-208ENST00000467539 PLIN4Q96Q06 1357 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 ORC4O43929 436 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 SLC25A27O95847 323 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 ERCC3P19447 782 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 PLS1Q14651 629 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 CCL14Q16627 93 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 PRPF38BQ5VTL8 546 aaKnown RBP21.53■■□□□ 1.04
CGREF1-208ENST00000467539 PRPF38AQ8NAV1 312 aaKnown RBP21.53■■□□□ 1.04
CGREF1-208ENST00000467539 GMCL1P1Q8NEA9 526 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 APBA2Q99767 749 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 ZMYM6O95789 1325 aa21.53■■□□□ 1.04
CGREF1-208ENST00000467539 ZKSCAN1P17029 563 aaPredicted RBP21.52■■□□□ 1.04
CGREF1-208ENST00000467539 CACNB2Q08289 660 aaPredicted RBP21.52■■□□□ 1.04
CGREF1-208ENST00000467539 SAMD1Q6SPF0 538 aaPredicted RBP21.52■■□□□ 1.04
CGREF1-208ENST00000467539 NUP88Q99567 741 aaPredicted RBP21.52■■□□□ 1.04
CGREF1-208ENST00000467539 IL17RBQ9NRM6 502 aa21.52■■□□□ 1.04
CGREF1-208ENST00000467539 TSPY2A6NKD2 308 aa21.51■■□□□ 1.03
CGREF1-208ENST00000467539 STAT3P40763 770 aa21.51■■□□□ 1.03
CGREF1-208ENST00000467539 CWC27Q6UX04 472 aaKnown RBP21.51■■□□□ 1.03
CGREF1-208ENST00000467539 RIOX2Q8IUF8 465 aa21.51■■□□□ 1.03
CGREF1-208ENST00000467539 ABRAQ8N0Z2 381 aa21.51■■□□□ 1.03
CGREF1-208ENST00000467539 REPS2Q8NFH8 660 aa21.51■■□□□ 1.03
CGREF1-208ENST00000467539 SLF1Q9BQI6 1058 aa21.51■■□□□ 1.03
CGREF1-208ENST00000467539 DIAPH3Q9NSV4 1193 aa21.51■■□□□ 1.03
CGREF1-208ENST00000467539 RANBP6O60518 1105 aaKnown RBP21.5■■□□□ 1.03
CGREF1-208ENST00000467539 PRKAR2AP13861 404 aaKnown RBP21.5■■□□□ 1.03
CGREF1-208ENST00000467539 NOVP48745 357 aa21.5■■□□□ 1.03
CGREF1-208ENST00000467539 SLFN13Q68D06 897 aa21.5■■□□□ 1.03
CGREF1-208ENST00000467539 DPP9Q86TI2 863 aa21.5■■□□□ 1.03
CGREF1-208ENST00000467539 NCAPG2Q86XI2 1143 aa21.5■■□□□ 1.03
CGREF1-208ENST00000467539 NPLOC4Q8TAT6 608 aa21.5■■□□□ 1.03
CGREF1-208ENST00000467539 FEM1BQ9UK73 627 aa21.5■■□□□ 1.03
CGREF1-208ENST00000467539 IGHA2P01877 340 aa21.49■■□□□ 1.03
CGREF1-208ENST00000467539 ADORA2AP29274 412 aa21.49■■□□□ 1.03
CGREF1-208ENST00000467539 MFSD14CQ5VZR4 134 aa21.49■■□□□ 1.03
CGREF1-208ENST00000467539 LRRC47Q8N1G4 583 aaKnown RBP21.49■■□□□ 1.03
CGREF1-208ENST00000467539 FLRT1Q9NZU1 646 aa21.49■■□□□ 1.03
CGREF1-208ENST00000467539 ZNF214Q9UL59 606 aaPredicted RBP21.49■■□□□ 1.03
CGREF1-208ENST00000467539 PCP11498 1178 aaKnown RBP21.48■■□□□ 1.03
CGREF1-208ENST00000467539 FCER1AP12319 257 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 BMP3P12645 472 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 COPB2P35606 906 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 TTC22Q5TAA0 569 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 ANKLE1Q8NAG6 615 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 GMCL1Q96IK5 515 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 TCP11L1Q9NUJ3 509 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 SLC5A4Q9NY91 659 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 STX8Q9UNK0 236 aa21.48■■□□□ 1.03
CGREF1-208ENST00000467539 ATP2A1O14983 1001 aa21.47■■□□□ 1.03
CGREF1-208ENST00000467539 COBLO75128 1261 aa21.47■■□□□ 1.03
CGREF1-208ENST00000467539 ZBED4O75132 1171 aa21.47■■□□□ 1.03
CGREF1-208ENST00000467539 FARP2O94887 1054 aaPredicted RBP21.47■■□□□ 1.03
CGREF1-208ENST00000467539 AKNAD1Q5T1N1 836 aa21.47■■□□□ 1.03
CGREF1-208ENST00000467539 OLFML2BQ68BL8 750 aa21.47■■□□□ 1.03
CGREF1-208ENST00000467539 MFSD6Q6ZSS7 791 aa21.47■■□□□ 1.03
CGREF1-208ENST00000467539 ZNF213O14771 459 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 NMT2O60551 498 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 PLA2G6O60733 806 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 FDX1P10109 184 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 GSPT1P15170 499 aaKnown RBP21.46■■□□□ 1.03
CGREF1-208ENST00000467539 HAND2P61296 217 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 CHURC1Q8WUH1 139 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 STAG1Q8WVM7 1258 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 DSCC1Q9BVC3 393 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 TOMM22Q9NS69 142 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 OGDHLQ9ULD0 1010 aa21.46■■□□□ 1.03
CGREF1-208ENST00000467539 MCCP23508 829 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 CCND3P30281 292 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms