RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 HSD3B7Q9H2F3 369 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 SRP68Q9UHB9 627 aaKnown RBP20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 PCDHA5Q9Y5H7 936 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 MYO1BO43795 1136 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 PRPF38AQ8NAV1 312 aaKnown RBP20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 JPH2Q9BR39 696 aaPredicted RBP20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 VPS54Q9P1Q0 977 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
SNAPC3-205ENST00000467062 MYH14Q7Z406 1995 aaKnown RBP20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 NMT2O60551 498 aa20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 GNAT2P19087 354 aa20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 ZNF827Q17R98 1081 aa20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 JMYQ8N9B5 988 aa20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 FAM84BQ96KN1 310 aaPredicted RBP20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 C4AP0C0L4 1744 aa20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 C4BP0C0L5 1744 aa20.33■□□□□ 0.85
SNAPC3-205ENST00000467062 DOT1LQ8TEK3 1739 aa20.33■□□□□ 0.84
SNAPC3-205ENST00000467062 SHOX2O60902 331 aaPredicted RBP20.33■□□□□ 0.84
SNAPC3-205ENST00000467062 BMP6P22004 513 aa20.33■□□□□ 0.84
SNAPC3-205ENST00000467062 RDXP35241 583 aaKnown RBP20.33■□□□□ 0.84
SNAPC3-205ENST00000467062 MIEF2Q96C03 454 aa20.33■□□□□ 0.84
SNAPC3-205ENST00000467062 CCT5P48643 541 aa20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 VSNL1P62760 191 aa20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 PDE4BQ07343 736 aa20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 SAFBQ15424 915 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 SKIDA1Q1XH10 827 aa20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 EARS2Q5JPH6 523 aaKnown RBP20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 RIOK1Q9BRS2 568 aaKnown RBP20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 POLR2DO15514 142 aaKnown RBP20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 SCP2P22307 547 aa20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 ELF1P32519 619 aa20.32■□□□□ 0.84
SNAPC3-205ENST00000467062 COL1A1P02452 1464 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 ANKRD36CQ5JPF3 1778 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 LRRIQ3A6PVS8 624 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 PRPF6O94906 941 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 PLEKHA8P1O95397 391 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 MAP2K1Q02750 393 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 TOGARAM2Q6ZUX3 1019 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 ENAHQ8N8S7 591 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 KRI1Q8N9T8 703 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 EP400Q96L91 3159 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 USP17L21D6R901 530 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 MAP9Q49MG5 647 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 CAVIN4Q5BKX8 364 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 AATFQ9NY61 560 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 ZNF652Q9Y2D9 606 aa20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 V9GY48 417 aaPredicted RBP20.31■□□□□ 0.84
SNAPC3-205ENST00000467062 TAF1P21675 1872 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 RHOXF2BP0C7M4 288 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 ERCC3P19447 782 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 FAM47AQ5JRC9 791 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 RHOXF2Q9BQY4 288 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 FANCLQ9NW38 375 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 TUBE1Q9UJT0 475 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 COL16A1Q07092 1604 aaPredicted RBP20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 SPATA31A5Q5VU36 1347 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 SPATA31A7Q8IWB4 1347 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 SHTN1A0MZ66 631 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 WNT7AO00755 349 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 SYF2O95926 243 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 KARSQ15046 597 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 ESR2Q92731 530 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 CDCA7Q9BWT1 371 aaPredicted RBP20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 VEZTQ9HBM0 779 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 SERTAD1Q9UHV2 236 aa20.3■□□□□ 0.84
SNAPC3-205ENST00000467062 DEXIO95424 95 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 MYL5Q02045 173 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 SEC23AQ15436 765 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 TXNRD3Q86VQ6 643 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 AMIGO3Q86WK7 504 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 SGSM3Q96HU1 749 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 RNF41Q9H4P4 317 aaPredicted RBP20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 TMEM232C9JQI7 657 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 CHUKO15111 745 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 KIF5CO60282 957 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 CCDC175P0C221 793 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 CASP1P29466 404 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 PRDX5P30044 214 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 BSDC1Q9NW68 430 aaPredicted RBP20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 MCM8Q9UJA3 840 aa20.29■□□□□ 0.84
SNAPC3-205ENST00000467062 ROBO1Q9Y6N7 1651 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 CTAGE15A4D2H0 777 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 CTAGE8P0CG41 777 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 CYP2D6P10635 497 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 VEGFAP15692 232 aaPredicted RBP20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 NF2P35240 595 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 WDR93Q6P2C0 686 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 CTAGE6Q86UF2 777 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 CTAGE4Q8IX94 777 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 RNF217Q8TC41 542 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 ZSCAN10Q96SZ4 725 aaPredicted RBP20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 FBXO2Q9UK22 296 aaPredicted RBP20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 ZNF804BA4D1E1 1349 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 STK36Q9NRP7 1315 aa20.28■□□□□ 0.84
SNAPC3-205ENST00000467062 TMCO5BA8MYB1 307 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms