RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
SFXN3-204ENST00000466982 SPDL1Q96EA4 605 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.37□□□□□ -0.43
SFXN3-204ENST00000466982 G3BP2Q9UN86 482 aaKnown RBP12.37□□□□□ -0.43
SFXN3-204ENST00000466982 SAR1BQ9Y6B6 198 aa12.37□□□□□ -0.43
SFXN3-204ENST00000466982 MEFVO15553 781 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-204ENST00000466982 MYL6BP14649 208 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 AFMP43652 599 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 MYBPC2Q14324 1141 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 TTMPQ5BVD1 217 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 NT5DC1Q5TFE4 455 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
SFXN3-204ENST00000466982 LZTS2Q9BRK4 669 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 RASA3Q14644 834 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 NAA25Q14CX7 972 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 CCDC178Q5BJE1 867 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 SPATA21Q7Z572 469 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 TMTC1Q8IUR5 882 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 TSEN2Q8NCE0 465 aaKnown RBP12.36□□□□□ -0.43
SFXN3-204ENST00000466982 MYD88Q99836 296 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 VPS16Q9H269 839 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 PICK1Q9NRD5 415 aa12.36□□□□□ -0.43
SFXN3-204ENST00000466982 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 H7C1W4 665 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 KIAA0754O94854 1291 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 FSBPO95073 299 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 GCKRQ14397 625 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 MB21D2Q8IYB1 491 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 MAB21L3Q8N8X9 362 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 DACH1Q9UI36 760 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 FGAP02671 866 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 KRT9P35527 623 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 SLC7A5Q01650 507 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 PPARAQ07869 468 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 DPYDQ12882 1025 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 SPATA1Q5VX52 437 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 MYL10Q9BUA6 226 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 MYO1AQ9UBC5 1043 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 DMGDHQ9UI17 866 aaKnown RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 SYNRGQ9UMZ2 1314 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 TMEM94Q12767 1356 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 ENO4A6NNW6 628 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 FECHP22830 423 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 KCNB1Q14721 858 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 NBPF14Q5TI25 921 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 CDKAL1Q5VV42 579 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 OR8K1Q8NGG5 319 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 CAGE1Q8TC20 777 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 AENQ8WTP8 325 aaKnown RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 JAKMIP2Q96AA8 810 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 AIDAQ96BJ3 306 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 SUN2Q9UH99 717 aa12.35□□□□□ -0.43
SFXN3-204ENST00000466982 DDX20Q9UHI6 824 aaKnown RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 EPN1Q9Y6I3 576 aaPredicted RBP12.35□□□□□ -0.43
SFXN3-204ENST00000466982 RFX7Q2KHR2 1363 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 BTBD18B2RXH4 712 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 PES1O00541 588 aaKnown RBP12.34□□□□□ -0.43
SFXN3-204ENST00000466982 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
SFXN3-204ENST00000466982 NDUFA10O95299 355 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 SSBP05455 408 aaKnown RBP eCLIP12.34□□□□□ -0.43
SFXN3-204ENST00000466982 ERCC5P28715 1186 aaPredicted RBP12.34□□□□□ -0.43
SFXN3-204ENST00000466982 GUCY1A3Q02108 690 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 LAMB3Q13751 1172 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 UBE3BQ7Z3V4 1068 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 CEP57Q86XR8 500 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 ATL2Q8NHH9 583 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 STAMQ92783 540 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 YIPF2Q9BWQ6 316 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 FBXO2Q9UK22 296 aaPredicted RBP12.34□□□□□ -0.43
SFXN3-204ENST00000466982 DUSP10Q9Y6W6 482 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 MRC1P22897 1456 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 A0A087X0B3 334 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 TARSL2A2RTX5 802 aaKnown RBP12.34□□□□□ -0.43
SFXN3-204ENST00000466982 PSMD14O00487 310 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 N4BP3O15049 544 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 KRT14P02533 472 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 PDHBP11177 359 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 MCM3P25205 808 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 TPP2P29144 1249 aaPredicted RBP12.34□□□□□ -0.43
SFXN3-204ENST00000466982 SEC24CP53992 1094 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 APBA1Q02410 837 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 USP4Q13107 963 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 CUL4BQ13620 913 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 PDIA6Q15084 440 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 FILIP1LQ4L180 1135 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 MICU3Q86XE3 530 aa12.34□□□□□ -0.43
SFXN3-204ENST00000466982 RCCD1A6NED2 376 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms