RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 PNMA1Q8ND90 353 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 TMEM87BQ96K49 555 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 CPA4Q9UI42 421 aa16.96■□□□□ 0.31
DNMT3A-208ENST00000466601 FLOT1O75955 427 aa16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 PSMA5P28066 241 aa16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 GCLCP48506 637 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 LBX1P52954 281 aa16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 EXOSC10Q01780 885 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 GTF3C2Q8WUA4 911 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 DCAF4Q8WV16 495 aa16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 HOXC10Q9NYD6 342 aa16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 ISY1Q9ULR0 285 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
DNMT3A-208ENST00000466601 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 PDHBP11177 359 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 DSG3P32926 999 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 BLOC1S2Q6QNY1 142 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 SAMD1Q6SPF0 538 aaPredicted RBP16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 ANKRD13CQ8N6S4 541 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 LY9Q9HBG7 655 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 GPHNQ9NQX3 736 aaPredicted RBP16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
DNMT3A-208ENST00000466601 PCNTO95613 3336 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 TMEM232C9JQI7 657 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 SH2B2O14492 632 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 FKTNO75072 461 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 BCRP11274 1271 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 CPA1P15085 419 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 CASTP20810 708 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 SP3Q02447 781 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 CCDC96Q2M329 555 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 LBX2Q6XYB7 198 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 TMTC2Q8N394 836 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 ZNF296Q8WUU4 475 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 PPP1R9AQ9ULJ8 1098 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 MYPNQ86TC9 1320 aa16.93■□□□□ 0.3
DNMT3A-208ENST00000466601 SNHG28P0DPA3 235 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 LIFRP42702 1097 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 ANAPC15P60006 121 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 FAM110CQ1W6H9 321 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 POTEEQ6S8J3 1075 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 FAM160B2Q86V87 743 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 PRPF38AQ8NAV1 312 aaKnown RBP16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 CHURC1Q8WUH1 139 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 ATG4CQ96DT6 458 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 SLF1Q9BQI6 1058 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 TM6SF1Q9BZW5 370 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 RBPJLQ9UBG7 517 aa16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 FRMPD2Q68DX3 1309 aaPredicted RBP16.92■□□□□ 0.3
DNMT3A-208ENST00000466601 PLA2G6O60733 806 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 STAT2P52630 851 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 ZNF543Q08ER8 600 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 IKQ13123 557 aaPredicted RBP16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 CATIPQ7Z7H3 387 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 KIFC2Q96AC6 838 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 PAGR1Q9BTK6 254 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 TXNRD2Q9NNW7 524 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 GPCPD1Q9NPB8 672 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 MORF4L1Q9UBU8 362 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 ADAMTS5Q9UNA0 930 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
DNMT3A-208ENST00000466601 CCDC69A6NI79 296 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 PEX10O60683 326 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 CNMDO75829 334 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 GPATCH4Q5T3I0 446 aaKnown RBP16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 TTBK2Q6IQ55 1244 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 RUFY3Q7L099 469 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 MB21D1Q8N884 522 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 GPRC5AQ8NFJ5 357 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 ERO1AQ96HE7 468 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 PRDM10Q9NQV6 1147 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 CYP46A1Q9Y6A2 500 aa16.9■□□□□ 0.3
DNMT3A-208ENST00000466601 VWA5AO00534 786 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 PARP1P09874 1014 aaKnown RBP16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 GOLGA8HP0CJ92 632 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 ERVK-24P63145 666 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 LACTBP83111 547 aaPredicted RBP16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 FGD1P98174 961 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 TROAPQ12815 778 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 KIF22Q14807 665 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 Q3C1V9 767 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 ASPRV1Q53RT3 343 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 Q6ZUG5 572 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 SGMS1Q86VZ5 419 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.29
DNMT3A-208ENST00000466601 CD99L2Q8TCZ2 262 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms