RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 MAP3K11Q16584 847 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 ASPRV1Q53RT3 343 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 CSRNP1Q96S65 589 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 PANK2Q9BZ23 570 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 TNMDQ9H2S6 317 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 NLRP5P59047 1200 aa24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 SNW1Q13573 536 aaKnown RBP24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 TNIP1Q15025 636 aa24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 AXDND1Q5T1B0 1012 aaPredicted RBP24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 FKBP1CQ5VVH2 108 aa24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 ENGASEQ8NFI3 743 aa24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 TNFRSF25Q93038 417 aa24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 CABP5Q9NP86 173 aa24.29■■□□□ 1.48
PPP1R3F-203ENST00000466508 TCP10L2B9ZVM9 353 aa24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 CALML3P27482 149 aa24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 CAMK4Q16566 473 aa24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 RBM43Q6ZSC3 357 aaKnown RBP24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 FAM177A1Q8N128 213 aaPredicted RBP24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 FUCA2Q9BTY2 467 aa24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 MARCKSP29966 332 aaPredicted RBP24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 FAM151AQ8WW52 585 aa24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 GPKOWQ92917 476 aaPredicted RBP eCLIP24.28■■□□□ 1.48
PPP1R3F-203ENST00000466508 CNTNAP1P78357 1384 aa24.27■■□□□ 1.48
PPP1R3F-203ENST00000466508 ZBED3Q96IU2 234 aaPredicted RBP24.27■■□□□ 1.48
PPP1R3F-203ENST00000466508 CPVLQ9H3G5 476 aa24.27■■□□□ 1.48
PPP1R3F-203ENST00000466508 KANSL2Q9H9L4 492 aa24.27■■□□□ 1.48
PPP1R3F-203ENST00000466508 BARHL2Q9NY43 387 aa24.27■■□□□ 1.48
PPP1R3F-203ENST00000466508 HERC5Q9UII4 1024 aaKnown RBP24.27■■□□□ 1.48
PPP1R3F-203ENST00000466508 MMP14P50281 582 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 WWC2Q6AWC2 1192 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 TMEM179Q6ZVK1 233 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 CCDC148Q8NFR7 591 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 MYO1BO43795 1136 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 KINO60870 393 aaKnown RBP24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 CMA1P23946 247 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 EARS2Q5JPH6 523 aaKnown RBP24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 HEATR3Q7Z4Q2 680 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 FMR1NBQ8N0W7 255 aaPredicted RBP24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 RRP36Q96EU6 259 aaKnown RBP24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 RIOX1Q9H6W3 641 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 CEP131Q9UPN4 1083 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 PCDHB6Q9Y5E3 794 aa24.26■■□□□ 1.47
PPP1R3F-203ENST00000466508 FRMPD2Q68DX3 1309 aaPredicted RBP24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 A0A1B0GVL5 298 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 FAM205CA6NFA0 338 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 RPS12P25398 132 aaKnown RBP24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 ATP2B2Q01814 1243 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 RASSF7Q02833 373 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 ABCB5Q2M3G0 1257 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 TYW1BQ6NUM6 668 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 MKL1Q969V6 931 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 MYOZ2Q9NPC6 264 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 NYAP2Q9P242 653 aa24.25■■□□□ 1.47
PPP1R3F-203ENST00000466508 STXBP3O00186 592 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 NDUFA8P51970 172 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 ZNF543Q08ER8 600 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 SHROOM1Q2M3G4 852 aaPredicted RBP24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 GALNT17Q6IS24 598 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 FAM83AQ86UY5 434 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 VEZTQ9HBM0 779 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 SEC63Q9UGP8 760 aaKnown RBP24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 NOL7Q9UMY1 257 aaKnown RBP24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 PCDHA4Q9UN74 947 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 WNT10BO00744 389 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 CTAGE5O15320 804 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 CUTAO60888 179 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 CCDC192P0DO97 292 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 BLIDQ8IZY5 108 aa24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 MORC2Q9Y6X9 1032 aaPredicted RBP24.24■■□□□ 1.47
PPP1R3F-203ENST00000466508 TRIM75PA6NK02 468 aa24.23■■□□□ 1.47
PPP1R3F-203ENST00000466508 EEF2P13639 858 aaKnown RBP24.23■■□□□ 1.47
PPP1R3F-203ENST00000466508 ICA1Q05084 483 aa24.23■■□□□ 1.47
PPP1R3F-203ENST00000466508 SEPT2Q15019 361 aa24.23■■□□□ 1.47
PPP1R3F-203ENST00000466508 GPATCH4Q5T3I0 446 aaKnown RBP24.23■■□□□ 1.47
PPP1R3F-203ENST00000466508 CKAP2LQ8IYA6 745 aa24.23■■□□□ 1.47
PPP1R3F-203ENST00000466508 DAGLBQ8NCG7 672 aa24.23■■□□□ 1.47
PPP1R3F-203ENST00000466508 GDF11O95390 407 aa24.22■■□□□ 1.47
PPP1R3F-203ENST00000466508 ZNF280AP59817 542 aaPredicted RBP24.22■■□□□ 1.47
PPP1R3F-203ENST00000466508 HOMER1Q86YM7 354 aa24.22■■□□□ 1.47
PPP1R3F-203ENST00000466508 KRI1Q8N9T8 703 aaKnown RBP24.22■■□□□ 1.47
PPP1R3F-203ENST00000466508 CCDC12Q8WUD4 166 aaPredicted RBP24.22■■□□□ 1.47
PPP1R3F-203ENST00000466508 UBA5Q9GZZ9 404 aa24.22■■□□□ 1.47
PPP1R3F-203ENST00000466508 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.22■■□□□ 1.47
PPP1R3F-203ENST00000466508 TRAPPC10P48553 1259 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 PRELPP51888 382 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 NBPF9Q3BBW0 867 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 NOM1Q5C9Z4 860 aaKnown RBP24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 RBM26Q5T8P6 1007 aaKnown RBP24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 RNF214Q8ND24 703 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 PIGSQ96S52 555 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 FZD9O00144 591 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 PFKFB1P16118 471 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 ATP2B1P20020 1258 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 SHC4Q6S5L8 630 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 VAT1LQ9HCJ6 419 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 GPCPD1Q9NPB8 672 aa24.21■■□□□ 1.47
PPP1R3F-203ENST00000466508 FAM237AA0A1B0GTK4 181 aa24.2■■□□□ 1.46
PPP1R3F-203ENST00000466508 SHTN1A0MZ66 631 aa24.2■■□□□ 1.46
PPP1R3F-203ENST00000466508 hCG_1984214I3L0E3 225 aa24.2■■□□□ 1.46
PPP1R3F-203ENST00000466508 M0R2N6 131 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms