RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 IFIT3O14879 490 aaKnown RBP21.59■■□□□ 1.05
HOXA9-203ENST00000465941 FLOT1O75955 427 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 DSG3P32926 999 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 SLC1A4P43007 532 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 FAM110CQ1W6H9 321 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 ADCK5Q3MIX3 580 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 IFIT1BQ5T764 474 aaKnown RBP21.59■■□□□ 1.05
HOXA9-203ENST00000465941 POTEEQ6S8J3 1075 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 DCAF4Q8WV16 495 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 KAT14Q9H8E8 782 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 RBPJLQ9UBG7 517 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 MORF4L1Q9UBU8 362 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 FEM1BQ9UK73 627 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 ADAMTS5Q9UNA0 930 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 MYH4Q9Y623 1939 aa21.59■■□□□ 1.05
HOXA9-203ENST00000465941 SPDYE16A6NNV3 312 aaPredicted RBP21.58■■□□□ 1.05
HOXA9-203ENST00000465941 PRC1O43663 620 aa21.58■■□□□ 1.05
HOXA9-203ENST00000465941 HMGB1P09429 215 aaKnown RBP21.58■■□□□ 1.05
HOXA9-203ENST00000465941 COL9A3Q14050 684 aaPredicted RBP21.58■■□□□ 1.05
HOXA9-203ENST00000465941 PNMA1Q8ND90 353 aa21.58■■□□□ 1.05
HOXA9-203ENST00000465941 TMEM87BQ96K49 555 aa21.58■■□□□ 1.05
HOXA9-203ENST00000465941 FBXO28Q9NVF7 368 aa21.58■■□□□ 1.05
HOXA9-203ENST00000465941 RABGAP1Q9Y3P9 1069 aa21.58■■□□□ 1.05
HOXA9-203ENST00000465941 WDR19Q8NEZ3 1342 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 PLA2G6O60733 806 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 SEC24BO95487 1268 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 SNHG28P0DPA3 235 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 PDHBP11177 359 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 LACTBP83111 547 aaPredicted RBP21.57■■□□□ 1.04
HOXA9-203ENST00000465941 WTAPQ15007 396 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 TMEM67Q5HYA8 995 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 DHX32Q7L7V1 743 aaKnown RBP21.57■■□□□ 1.04
HOXA9-203ENST00000465941 MB21D1Q8N884 522 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 PRPF38AQ8NAV1 312 aaKnown RBP21.57■■□□□ 1.04
HOXA9-203ENST00000465941 GPRC5AQ8NFJ5 357 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 ERO1AQ96HE7 468 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 TXNRD2Q9NNW7 524 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 PPP1R9AQ9ULJ8 1098 aa21.57■■□□□ 1.04
HOXA9-203ENST00000465941 EXOSC10Q01780 885 aaKnown RBP21.56■■□□□ 1.04
HOXA9-203ENST00000465941 TMTC2Q8N394 836 aa21.56■■□□□ 1.04
HOXA9-203ENST00000465941 CHURC1Q8WUH1 139 aa21.56■■□□□ 1.04
HOXA9-203ENST00000465941 SLF1Q9BQI6 1058 aa21.56■■□□□ 1.04
HOXA9-203ENST00000465941 TMEM232C9JQI7 657 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 CNMDO75829 334 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 LIFRP42702 1097 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 KIF22Q14807 665 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 KCTD1Q719H9 257 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 FAM160B2Q86V87 743 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 ATG4CQ96DT6 458 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 LY9Q9HBG7 655 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 MTMR7Q9Y216 660 aa21.55■■□□□ 1.04
HOXA9-203ENST00000465941 VWA5AO00534 786 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 PSMA5P28066 241 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 STAT2P52630 851 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 ERVK-9P63128 1117 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 ERVK-24P63145 666 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 ZNF543Q08ER8 600 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 ARHGEF6Q15052 776 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 Q3C1V9 767 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 CD99L2Q8TCZ2 262 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 CHMP4CQ96CF2 233 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 JAKMIP1Q96N16 626 aaKnown RBP21.54■■□□□ 1.04
HOXA9-203ENST00000465941 PAGR1Q9BTK6 254 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 SENP2Q9HC62 589 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 BTBD7Q9P203 1132 aa21.54■■□□□ 1.04
HOXA9-203ENST00000465941 SH2B2O14492 632 aaPredicted RBP21.53■■□□□ 1.04
HOXA9-203ENST00000465941 PEX10O60683 326 aa21.53■■□□□ 1.04
HOXA9-203ENST00000465941 CCDC96Q2M329 555 aa21.53■■□□□ 1.04
HOXA9-203ENST00000465941 GPATCH4Q5T3I0 446 aaKnown RBP21.53■■□□□ 1.04
HOXA9-203ENST00000465941 BTNL9Q6UXG8 535 aa21.53■■□□□ 1.04
HOXA9-203ENST00000465941 RASGRP2Q7LDG7 609 aa21.53■■□□□ 1.04
HOXA9-203ENST00000465941 TM6SF1Q9BZW5 370 aa21.53■■□□□ 1.04
HOXA9-203ENST00000465941 GNRH1P01148 92 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 FDX1P10109 184 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 PSMC4P43686 418 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 ANAPC15P60006 121 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 CAP1Q01518 475 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 BLOC1S2Q6QNY1 142 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 SAMD1Q6SPF0 538 aaPredicted RBP21.52■■□□□ 1.04
HOXA9-203ENST00000465941 KIFC2Q96AC6 838 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 GPHNQ9NQX3 736 aaPredicted RBP21.52■■□□□ 1.04
HOXA9-203ENST00000465941 ISY1Q9ULR0 285 aaKnown RBP21.52■■□□□ 1.04
HOXA9-203ENST00000465941 RLFQ13129 1914 aa21.52■■□□□ 1.04
HOXA9-203ENST00000465941 CTGFP29279 349 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 FCGRTP55899 365 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 CCNA1P78396 465 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 TROAPQ12815 778 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 IKQ13123 557 aaPredicted RBP21.51■■□□□ 1.03
HOXA9-203ENST00000465941 ASPRV1Q53RT3 343 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 TTBK2Q6IQ55 1244 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 CATIPQ7Z7H3 387 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 REPS2Q8NFH8 660 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 IL17RAQ96F46 866 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 TRIM47Q96LD4 638 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 LRRC2Q9BYS8 371 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 ARHGAP39Q9C0H5 1083 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 SLC38A10Q9HBR0 1119 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 ZSWIM6Q9HCJ5 1215 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 GPCPD1Q9NPB8 672 aa21.51■■□□□ 1.03
HOXA9-203ENST00000465941 FRMPD2Q68DX3 1309 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms