RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TNKSO95271 1327 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 MCM7P33993 719 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 CTSWP56202 376 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 PPARAQ07869 468 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 C2orf54Q08AI8 447 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 HDAC7Q8WUI4 952 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 KAT14Q9H8E8 782 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 POLD4Q9HCU8 107 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 AGPAT5Q9NUQ2 364 aa14.17□□□□□ -0.14
CLCNKA-204ENST00000464764 ABCC12Q96J65 1359 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 SEMA3EO15041 775 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 BCAMP50895 628 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 EVX2Q03828 476 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 MAP3K12Q12852 859 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 E2F4Q16254 413 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 SMCR8Q8TEV9 937 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 COG1Q8WTW3 980 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 SMARCC1Q92922 1105 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 PHF20Q9BVI0 1012 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 ASAP1Q9ULH1 1129 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 ATRNO75882 1429 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 MACROD2A1Z1Q3 448 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 CCT5P48643 541 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 DNAJC21Q5F1R6 531 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 TTC38Q5R3I4 469 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 KIF6Q6ZMV9 814 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 NLRP10Q86W26 655 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 OR8K1Q8NGG5 319 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 JAKMIP2Q96AA8 810 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 PLA2G12BQ9BX93 195 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 ACBD3Q9H3P7 528 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 MYO1AQ9UBC5 1043 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 TRMT112Q9UI30 125 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 KIF13AQ9H1H9 1805 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 PKD1L3Q7Z443 1732 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 NKRFO15226 690 aaKnown RBP eCLIP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 PARP1P09874 1014 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 AARSP49588 968 aaKnown RBP eCLIP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 NPY5RQ15761 445 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 PDXDC2PQ6P474 469 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 PIK3AP1Q6ZUJ8 805 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 TOM1L2Q6ZVM7 507 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 ADGRA1Q86SQ6 560 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 MICALL1Q8N3F8 863 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 CAGE1Q8TC20 777 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 SELENOOQ9BVL4 669 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 SMARCAL1Q9NZC9 954 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 RWDD2AQ9UIY3 292 aa14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 LUC7L2Q9Y383 392 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-204ENST00000464764 WDR17Q8IZU2 1322 aa14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 PSMD14O00487 310 aa14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 RRP36Q96EU6 259 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 PSMB7Q99436 277 aa14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 MATR3P43243 847 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 LIG3P49916 1009 aa14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 TUBB4BP68371 445 aa14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 FUT2Q10981 343 aa14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 TRIM28Q13263 835 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 KIAA1328Q86T90 577 aa14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 ENAHQ8N8S7 591 aaPredicted RBP14.15□□□□□ -0.14
CLCNKA-204ENST00000464764 CCNI2Q6ZMN8 369 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 MB21D1Q8N884 522 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 JADE2Q9NQC1 790 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 SOS2Q07890 1332 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 PP2D1A8MPX8 630 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 EXOC5O00471 708 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 RPN1P04843 607 aaKnown RBP14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 SLC7A5Q01650 507 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 SEC23AQ15436 765 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 CT47A1Q5JQC4 288 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 KRT26Q7Z3Y9 468 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 FERMT2Q96AC1 680 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 RNF26Q9BY78 433 aaPredicted RBP14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 HAUS4Q9H6D7 363 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 LAMB4A4D0S4 1761 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 MYH7P12883 1935 aa14.14□□□□□ -0.15
CLCNKA-204ENST00000464764 WTIPA6NIX2 430 aaPredicted RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 B4DLN1 442 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 IRX3P78415 501 aaPredicted RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 PPM1EQ8WY54 764 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 NACAP1Q9BZK3 213 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 VIPAS39Q9H9C1 493 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 EHD2Q9NZN4 543 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 NUP188Q5SRE5 1749 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 NMT2O60551 498 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 UQCRFS1P1P0C7P4 283 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 PUM3Q15397 648 aaKnown RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 PAPD7Q5XG87 772 aaKnown RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 ANKRD20A12PQ8NF67 263 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 LPIN2Q92539 896 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 DMGDHQ9UI17 866 aaKnown RBP14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 RASSF10A6NK89 507 aa14.13□□□□□ -0.15
CLCNKA-204ENST00000464764 PLEKP08567 350 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms