RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 FBXL21Q9UKT6 434 aa6.43□□□□□ -1.38
CLK1-208ENST00000464454 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
CLK1-208ENST00000464454 SIGLEC6O43699 453 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 LTKP29376 864 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 CD96P40200 585 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 SLC7A5Q01650 507 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 AUHQ13825 339 aaKnown RBP6.42□□□□□ -1.38
CLK1-208ENST00000464454 GAB4Q2WGN9 574 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 GNPTABQ3T906 1256 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 ANKRD39Q53RE8 183 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 SLC23A3Q6PIS1 610 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 C7orf61Q8IZ16 206 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 FAM169BQ8N8A8 192 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 DAGLBQ8NCG7 672 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 PI4K2BQ8TCG2 481 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 CCDC120Q96HB5 630 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 ZNF408Q9H9D4 720 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 ACTR10Q9NZ32 417 aa6.42□□□□□ -1.38
CLK1-208ENST00000464454 R3HCC1Q9Y3T6 440 aaKnown RBP6.42□□□□□ -1.38
CLK1-208ENST00000464454 C9IYK1 514 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 SMAD7O15105 426 aaKnown RBP6.41□□□□□ -1.38
CLK1-208ENST00000464454 IGSF3O75054 1194 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 ATP2B1P20020 1258 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 TCEAL1Q15170 157 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 TDRD10Q5VZ19 366 aaKnown RBP6.41□□□□□ -1.38
CLK1-208ENST00000464454 PPFIBP1Q86W92 1011 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 CREG2Q8IUH2 290 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 ABI1Q8IZP0 508 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 ZNF655Q8N720 491 aaPredicted RBP6.41□□□□□ -1.38
CLK1-208ENST00000464454 SYTL4Q96C24 671 aaPredicted RBP6.41□□□□□ -1.38
CLK1-208ENST00000464454 HDAC8Q9BY41 377 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 PRDM14Q9GZV8 571 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 CARS2Q9HA77 564 aaKnown RBP6.41□□□□□ -1.38
CLK1-208ENST00000464454 PPP1R1BQ9UD71 204 aaPredicted RBP6.41□□□□□ -1.38
CLK1-208ENST00000464454 OAS3Q9Y6K5 1087 aaKnown RBP6.41□□□□□ -1.38
CLK1-208ENST00000464454 LTBP3Q9NS15 1303 aa6.41□□□□□ -1.38
CLK1-208ENST00000464454 SHISA3A0PJX4 238 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 NAT2P11245 290 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 ETFBP38117 255 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 NCAPHQ15003 741 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 VHLLQ6RSH7 139 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 TMC3Q7Z5M5 1100 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 GBP3Q9H0R5 595 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 CHST7Q9NS84 486 aa6.4□□□□□ -1.38
CLK1-208ENST00000464454 PAX4O43316 350 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
CLK1-208ENST00000464454 PRAMEF1O95521 474 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 ESR1P03372 595 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 TP53P04637 393 aaPredicted RBP6.39□□□□□ -1.39
CLK1-208ENST00000464454 ITGA4P13612 1032 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 ENDOUP21128 410 aaKnown RBP6.39□□□□□ -1.39
CLK1-208ENST00000464454 TXKP42681 527 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 EGR3Q06889 387 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 SNW1Q13573 536 aaKnown RBP6.39□□□□□ -1.39
CLK1-208ENST00000464454 FXNQ16595 210 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 ZNF792Q3KQV3 632 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 NOL9Q5SY16 702 aaKnown RBP6.39□□□□□ -1.39
CLK1-208ENST00000464454 AXDND1Q5T1B0 1012 aaPredicted RBP6.39□□□□□ -1.39
CLK1-208ENST00000464454 HEATR6Q6AI08 1181 aaKnown RBP6.39□□□□□ -1.39
CLK1-208ENST00000464454 RNF111Q6ZNA4 994 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 ARMC5Q96C12 935 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 DSCC1Q9BVC3 393 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 GFOD1Q9NXC2 390 aa6.39□□□□□ -1.39
CLK1-208ENST00000464454 SSU72P8A0A1W2PR75 194 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 CD247P20963 164 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 IRAK1P51617 712 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 ZNF143P52747 638 aaPredicted RBP6.38□□□□□ -1.39
CLK1-208ENST00000464454 PCBP3P57721 371 aaKnown RBP6.38□□□□□ -1.39
CLK1-208ENST00000464454 LARP1BQ659C4 914 aaKnown RBP6.38□□□□□ -1.39
CLK1-208ENST00000464454 DCAF15Q66K64 600 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 UBXN4Q92575 508 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 ALPK1Q96QP1 1244 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 HAUS7Q99871 368 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 GP6Q9HCN6 339 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 FAM86C1Q9NVL1 165 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 WHRNQ9P202 907 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 PCDHA11Q9Y5I1 949 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 FHOD1Q9Y613 1164 aa6.38□□□□□ -1.39
CLK1-208ENST00000464454 A0A087WZG4 1122 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 WASH4PA8MWX3 477 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 SHOXO15266 292 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 GSNP06396 782 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 MCTP1Q6DN14 999 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 KIAA1211LQ6NV74 962 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 ANKS3Q6ZW76 656 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 CKAP2LQ8IYA6 745 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 KLHL6Q8WZ60 621 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 DHX38Q92620 1227 aaKnown RBP6.37□□□□□ -1.39
CLK1-208ENST00000464454 TCTN2Q96GX1 697 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 RC3H2Q9HBD1 1191 aaKnown RBP6.37□□□□□ -1.39
CLK1-208ENST00000464454 MBNL3Q9NUK0 354 aaKnown RBP6.37□□□□□ -1.39
CLK1-208ENST00000464454 ADGRE2Q9UHX3 823 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 PCDHB10Q9UN67 800 aa6.37□□□□□ -1.39
CLK1-208ENST00000464454 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
CLK1-208ENST00000464454 ANKRD34BA5PLL1 514 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 BIN1O00499 593 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 CBFA2T2O43439 604 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 PPM1BO75688 479 aa6.36□□□□□ -1.39
CLK1-208ENST00000464454 RNASE1P07998 156 aaKnown RBP6.36□□□□□ -1.39
CLK1-208ENST00000464454 DUSP4Q13115 394 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms