RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CLEC10AQ8IUN9 316 aa16.73■□□□□ 0.27
COL5A1-205ENST00000464187 CBX8Q9HC52 389 aa16.73■□□□□ 0.27
COL5A1-205ENST00000464187 GDF11O95390 407 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 TTLL1O95922 423 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 LMOD1P29536 600 aaPredicted RBP16.72■□□□□ 0.27
COL5A1-205ENST00000464187 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
COL5A1-205ENST00000464187 STK38Q15208 465 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 KRT40Q6A162 431 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 DPY19L2Q6NUT2 758 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 MIGA2Q7L4E1 593 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 LUZP1Q86V48 1076 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
COL5A1-205ENST00000464187 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 SLC26A6Q9BXS9 759 aa16.72■□□□□ 0.27
COL5A1-205ENST00000464187 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL5A1-205ENST00000464187 A0A1W2PQ27 194 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 A0A1W2PQ64 194 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 A0A1W2PQD8 194 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 CTAGE5O15320 804 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 TBC1D12O60347 775 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 FMNL1O95466 1100 aaPredicted RBP16.71■□□□□ 0.27
COL5A1-205ENST00000464187 HIRAP54198 1017 aaPredicted RBP16.71■□□□□ 0.27
COL5A1-205ENST00000464187 ABCB5Q2M3G0 1257 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 ANGEL2Q5VTE6 544 aaKnown RBP16.71■□□□□ 0.27
COL5A1-205ENST00000464187 ADALQ6DHV7 355 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 NBPF11Q86T75 865 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 TEPSINQ96N21 525 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 CLIP2Q9UDT6 1046 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
COL5A1-205ENST00000464187 UBE2Q2LH0YL09 131 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 KINO60870 393 aaKnown RBP16.7■□□□□ 0.26
COL5A1-205ENST00000464187 KIF5BP33176 963 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 PLCB2Q00722 1185 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
COL5A1-205ENST00000464187 TMEM179Q6ZVK1 233 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 TMTC3Q6ZXV5 915 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 TRIM22Q8IYM9 498 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 DNAJC25Q9H1X3 360 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 SPTLC2O15270 562 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 FUT2Q10981 343 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 ANO1Q5XXA6 986 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 FMR1NBQ8N0W7 255 aaPredicted RBP16.7■□□□□ 0.26
COL5A1-205ENST00000464187 LRRC47Q8N1G4 583 aaKnown RBP16.7■□□□□ 0.26
COL5A1-205ENST00000464187 KANSL2Q9H9L4 492 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
COL5A1-205ENST00000464187 GGA3Q9NZ52 723 aa16.7■□□□□ 0.26
COL5A1-205ENST00000464187 GH2P01242 217 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 ATP2B2Q01814 1243 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 GRM4Q14833 912 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 SEPT2Q15019 361 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 SF3A1Q15459 793 aaKnown RBP16.69■□□□□ 0.26
COL5A1-205ENST00000464187 APOBEC3FQ8IUX4 373 aaKnown RBP16.69■□□□□ 0.26
COL5A1-205ENST00000464187 STAG2Q8N3U4 1231 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 SRBD1Q8N5C6 995 aaKnown RBP16.69■□□□□ 0.26
COL5A1-205ENST00000464187 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 MAD2L2Q9UI95 211 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 MYH8P13535 1937 aa16.69■□□□□ 0.26
COL5A1-205ENST00000464187 A0A1B0GVL5 298 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 GUCY1A2P33402 732 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 JAG1P78504 1218 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 RASGRP2Q7LDG7 609 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 RNF26Q9BY78 433 aaPredicted RBP16.68■□□□□ 0.26
COL5A1-205ENST00000464187 ZC3H4Q9UPT8 1303 aaKnown RBP16.68■□□□□ 0.26
COL5A1-205ENST00000464187 DEXIO95424 95 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
COL5A1-205ENST00000464187 NDUFA8P51970 172 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 ICA1Q05084 483 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 L3MBTL3Q96JM7 780 aaPredicted RBP16.68■□□□□ 0.26
COL5A1-205ENST00000464187 NAP1L5Q96NT1 182 aaPredicted RBP16.68■□□□□ 0.26
COL5A1-205ENST00000464187 NYAP2Q9P242 653 aa16.68■□□□□ 0.26
COL5A1-205ENST00000464187 PALM3A6NDB9 673 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 OFD1O75665 1012 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 GOLGA8HP0CJ92 632 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 PDHBP11177 359 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 ZNF165P49910 485 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 GNAQP50148 359 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 AKAP17AQ02040 695 aaKnown RBP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 TRIM29Q14134 588 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 STX1AQ16623 288 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 AXDND1Q5T1B0 1012 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 C11orf57Q6ZUT1 292 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 WASF1Q92558 559 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
COL5A1-205ENST00000464187 CNTNAP5Q8WYK1 1306 aa16.67■□□□□ 0.26
COL5A1-205ENST00000464187 PRPF3O43395 683 aaKnown RBP16.66■□□□□ 0.26
COL5A1-205ENST00000464187 CAVIN2O95810 425 aa16.66■□□□□ 0.26
COL5A1-205ENST00000464187 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
COL5A1-205ENST00000464187 SLC39A14Q15043 492 aa16.66■□□□□ 0.26
COL5A1-205ENST00000464187 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
COL5A1-205ENST00000464187 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
COL5A1-205ENST00000464187 MKL1Q969V6 931 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms