RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 GOLGB1Q14789 3259 aaKnown RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 ERICH2A1L162 156 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 WNT7AO00755 349 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 WTAPQ15007 396 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 TBC1D9BQ66K14 1250 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 SDR42E1Q8WUS8 393 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 POLD4Q9HCU8 107 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 SYNRGQ9UMZ2 1314 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 DNAJC21Q5F1R6 531 aaKnown RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 AMIGO3Q86WK7 504 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 MLKLQ8NB16 471 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 DRC1Q96MC2 740 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 CYP2D7A0A087X1C5 515 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 GOLGA6L9A6NEM1 432 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 TUBB4AP04350 444 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 TBX2Q13207 712 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 FBXO33Q7Z6M2 555 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 SHISA4Q96DD7 197 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 FAM84BQ96KN1 310 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 PSMB7Q99436 277 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.06□□□□□ -0.16
HDAC4-208ENST00000463007 SLC4A4Q9Y6R1 1079 aa14.06□□□□□ -0.16
HDAC4-208ENST00000463007 MYH8P13535 1937 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 GYG1P46976 350 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 NR1I3Q14994 352 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 FILIP1LQ4L180 1135 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 TTC19Q6DKK2 380 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 FNBP4Q8N3X1 1017 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 SYMPKQ92797 1274 aaKnown RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CHP1Q99653 195 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CDC23Q9UJX2 597 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 RRP15Q9Y3B9 282 aaKnown RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CTAGE15A4D2H0 777 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CCDC151A5D8V7 595 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 MMP1P03956 469 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CTAGE8P0CG41 777 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 MATR3P43243 847 aaKnown RBP eCLIP14.05□□□□□ -0.162e-6■■■■□ 21
HDAC4-208ENST00000463007 FAM98CQ17RN3 349 aaKnown RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 HDXQ7Z353 690 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CTAGE6Q86UF2 777 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 CTAGE4Q8IX94 777 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 DACH1Q9UI36 760 aa14.05□□□□□ -0.16
HDAC4-208ENST00000463007 V9GY48 417 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 DDX60LQ5H9U9 1706 aaKnown RBP14.05□□□□□ -0.16
HDAC4-208ENST00000463007 PPARAQ07869 468 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 DHX8Q14562 1220 aaKnown RBP14.04□□□□□ -0.16
HDAC4-208ENST00000463007 ANKRD18AQ8IVF6 992 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 ENOX1Q8TC92 643 aaKnown RBP14.04□□□□□ -0.16
HDAC4-208ENST00000463007 CWC15Q9P013 229 aaKnown RBP14.04□□□□□ -0.16
HDAC4-208ENST00000463007 NARFQ9UHQ1 456 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 NUTM2BA6NNL0 878 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-208ENST00000463007 NUTM2EB1AL46 878 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-208ENST00000463007 TULP2O00295 520 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 ZNF18P17022 549 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 PTPREP23469 700 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 TM4SF1P30408 202 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 KRT9P35527 623 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 MORC3Q14149 939 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 PCMTD1Q96MG8 357 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-208ENST00000463007 UBAC1Q9BSL1 405 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 CDK5RAP2Q96SN8 1893 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 KLRK1P26718 216 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 PLCD1P51178 756 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 DNA2P51530 1060 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 FUT2Q10981 343 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 DPYDQ12882 1025 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 CASP8Q14790 479 aa14.04□□□□□ -0.16
HDAC4-208ENST00000463007 BEND6Q5SZJ8 279 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-208ENST00000463007 ERLIN1O75477 346 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 GYPCP04921 128 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 MCM7P33993 719 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 ACTN2P35609 894 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 KCNQ4P56696 695 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 BRIP1Q9BX63 1249 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 FAM204AQ9H8W3 233 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 LRP2BPQ9P2M1 347 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 UBR3Q6ZT12 1888 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 RPS6KA4O75676 772 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 KCTD19Q17RG1 926 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-208ENST00000463007 SMIM5Q71RC9 77 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 FCHSD1Q86WN1 690 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 NACAP1Q9BZK3 213 aa14.03□□□□□ -0.16
HDAC4-208ENST00000463007 TRIM49BA6NDI0 452 aa14.02□□□□□ -0.16
HDAC4-208ENST00000463007 TRIM75PA6NK02 468 aa14.02□□□□□ -0.16
HDAC4-208ENST00000463007 LRRIQ3A6PVS8 624 aaPredicted RBP14.02□□□□□ -0.16
HDAC4-208ENST00000463007 SEMA3EO15041 775 aa14.02□□□□□ -0.16
HDAC4-208ENST00000463007 ACTN4O43707 911 aaKnown RBP14.02□□□□□ -0.16
HDAC4-208ENST00000463007 CYP7A1P22680 504 aa14.02□□□□□ -0.16
HDAC4-208ENST00000463007 UBXN1Q04323 297 aa14.02□□□□□ -0.16
HDAC4-208ENST00000463007 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.16
HDAC4-208ENST00000463007 GOLGA6L1Q8N7Z2 621 aa14.02□□□□□ -0.16
HDAC4-208ENST00000463007 ERVK-24P63145 666 aa14.02□□□□□ -0.17
HDAC4-208ENST00000463007 RILPL1Q5EBL4 403 aa14.02□□□□□ -0.17
HDAC4-208ENST00000463007 LTBP1Q14766 1721 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms