RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 MSCO60682 206 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 GLRX3O76003 335 aaKnown RBP9.79□□□□□ -0.84
GARNL3-212ENST00000463005 PPP4CP60510 307 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 HERVK_113P62684 666 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 LRRC26Q2I0M4 334 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 HOMEZQ8IX15 550 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 NSUN4Q96CB9 384 aaKnown RBP9.79□□□□□ -0.84
GARNL3-212ENST00000463005 XAGE2Q96GT9 111 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 RBPJLQ9UBG7 517 aa9.79□□□□□ -0.84
GARNL3-212ENST00000463005 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 IGSF3O75054 1194 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 BAG3O95817 575 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 ERVK-9P63128 1117 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 ERVK-24P63145 666 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 SLFN5Q08AF3 891 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 RRP1BQ14684 758 aaKnown RBP9.78□□□□□ -0.84
GARNL3-212ENST00000463005 Q3C1V9 767 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 ZNF697Q5TEC3 545 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 GPR142Q7Z601 462 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 PLEKHH3Q7Z736 793 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 EDC3Q96F86 508 aaKnown RBP9.78□□□□□ -0.84
GARNL3-212ENST00000463005 NOL10Q9BSC4 688 aaKnown RBP9.78□□□□□ -0.84
GARNL3-212ENST00000463005 TRIM34Q9BYJ4 488 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 PRKAG2Q9UGJ0 569 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 PA2G4Q9UQ80 394 aaKnown RBP9.78□□□□□ -0.84
GARNL3-212ENST00000463005 LAMA3Q16787 3333 aa9.78□□□□□ -0.84
GARNL3-212ENST00000463005 CDK5RAP2Q96SN8 1893 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 CCND3P30281 292 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-212ENST00000463005 CCNA1P78396 465 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 GORABQ5T7V8 394 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 MFSD14CQ5VZR4 134 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L2Q6R6M4 530 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 METTL16Q86W50 562 aaKnown RBP9.77□□□□□ -0.85
GARNL3-212ENST00000463005 TEX11Q8IYF3 940 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 SPATA5Q8NB90 893 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 ZNF384Q8TF68 577 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 LPAR1Q92633 364 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 NEUROD6Q96NK8 337 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 GUCD1Q96NT3 240 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 APBA2Q99767 749 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 SENP6Q9GZR1 1112 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-212ENST00000463005 CWC22Q9HCG8 908 aaKnown RBP9.77□□□□□ -0.85
GARNL3-212ENST00000463005 TXNRD2Q9NNW7 524 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 RAI14Q9P0K7 980 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 HMG20BQ9P0W2 317 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
GARNL3-212ENST00000463005 GPR37L1O60883 481 aa9.76□□□□□ -0.85
GARNL3-212ENST00000463005 UQCRFS1P1P0C7P4 283 aa9.76□□□□□ -0.85
GARNL3-212ENST00000463005 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
GARNL3-212ENST00000463005 PORCNQ9H237 461 aa9.76□□□□□ -0.85
GARNL3-212ENST00000463005 LRP2BPQ9P2M1 347 aa9.76□□□□□ -0.85
GARNL3-212ENST00000463005 FOCADQ5VW36 1801 aa9.76□□□□□ -0.85
GARNL3-212ENST00000463005 RLFQ13129 1914 aa9.76□□□□□ -0.85
GARNL3-212ENST00000463005 MAST2Q6P0Q8 1798 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 SIPA1L1O43166 1804 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 SLC15A5A6NIM6 579 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L15C9J2P7 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L13C9JLJ4 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L11C9JVI0 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L18D6R9N7 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L22D6RA61 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L17D6RBQ6 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L19D6RCP7 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L20D6RJB6 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 DNM1LO00429 736 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 HOXC6P09630 235 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
GARNL3-212ENST00000463005 USP17L24Q0WX57 530 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 TFCP2Q12800 502 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 CCL14Q16627 93 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 ATF7IPQ6VMQ6 1270 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 TBC1D9Q6ZT07 1266 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 CRACR2BQ8N4Y2 399 aaPredicted RBP9.75□□□□□ -0.85
GARNL3-212ENST00000463005 ARRDC4Q8NCT1 418 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 SEMA6BQ9H3T3 888 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 DDX20Q9UHI6 824 aaKnown RBP9.75□□□□□ -0.85
GARNL3-212ENST00000463005 TSR3Q9UJK0 312 aaKnown RBP9.75□□□□□ -0.85
GARNL3-212ENST00000463005 MYH1P12882 1939 aa9.75□□□□□ -0.85
GARNL3-212ENST00000463005 HLA-DOAP06340 250 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 GNAI3P08754 354 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-212ENST00000463005 USP14P54578 494 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 MTX1Q13505 466 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 NR6A1Q15406 480 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 NAA16Q6N069 864 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-212ENST00000463005 SH3RF3Q8TEJ3 882 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-212ENST00000463005 TGFBRAP1Q8WUH2 860 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
GARNL3-212ENST00000463005 C12orf42Q96LP6 360 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 FAM161BQ96MY7 647 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 CDX2Q99626 313 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-212ENST00000463005 PRDM6Q9NQX0 595 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 SMC4Q9NTJ3 1288 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 AATFQ9NY61 560 aaKnown RBP eCLIP9.74□□□□□ -0.85
GARNL3-212ENST00000463005 ZBTB21Q9ULJ3 1066 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 IVNS1ABPQ9Y6Y0 642 aa9.74□□□□□ -0.85
GARNL3-212ENST00000463005 LTBP2Q14767 1821 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms