RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PARD3Q8TEW0 1356 aa9.78□□□□□ -0.84
UBE4B-204ENST00000462658 NPC1L1Q9UHC9 1359 aa9.78□□□□□ -0.84
UBE4B-204ENST00000462658 FAM221AA4D161 298 aa9.78□□□□□ -0.84
UBE4B-204ENST00000462658 TLR3O15455 904 aaKnown RBP9.78□□□□□ -0.84
UBE4B-204ENST00000462658 HCLS1P14317 486 aaPredicted RBP9.78□□□□□ -0.84
UBE4B-204ENST00000462658 RXRBP28702 533 aa9.78□□□□□ -0.84
UBE4B-204ENST00000462658 HSPA1LP34931 641 aa9.78□□□□□ -0.84
UBE4B-204ENST00000462658 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
UBE4B-204ENST00000462658 ATXN3LQ9H3M9 355 aa9.78□□□□□ -0.84
UBE4B-204ENST00000462658 DDX41Q9UJV9 622 aaKnown RBP9.78□□□□□ -0.84
UBE4B-204ENST00000462658 ROBO1Q9Y6N7 1651 aa9.77□□□□□ -0.84
UBE4B-204ENST00000462658 NSD3Q9BZ95 1437 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 PRAMEF27A3QJZ7 478 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
UBE4B-204ENST00000462658 RNGTTO60942 597 aaKnown RBP9.77□□□□□ -0.85
UBE4B-204ENST00000462658 IGHA1P01876 353 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 NEFMP07197 916 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 MAP4P27816 1152 aaKnown RBP9.77□□□□□ -0.85
UBE4B-204ENST00000462658 ERVK-24P63145 666 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 RAD51AP2Q09MP3 1159 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 RSPO4Q2I0M5 234 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-204ENST00000462658 GATAD2BQ8WXI9 593 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 LGR6Q9HBX8 967 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 PICK1Q9NRD5 415 aa9.77□□□□□ -0.85
UBE4B-204ENST00000462658 A0A1W2PP64 1363 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 CILPO75339 1184 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 NFICP08651 508 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 FURINP09958 794 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 RING1Q06587 406 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 PRR23CQ6ZRP0 262 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 BEND4Q6ZU67 534 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 HDXQ7Z353 690 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 NPM2Q86SE8 214 aaKnown RBP9.76□□□□□ -0.85
UBE4B-204ENST00000462658 CCDC84Q86UT8 332 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-204ENST00000462658 SPON2Q9BUD6 331 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 PIDD1Q9HB75 910 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 IGSF5Q9NSI5 407 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
UBE4B-204ENST00000462658 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 PRR36Q9H6K5 1346 aa9.76□□□□□ -0.85
UBE4B-204ENST00000462658 ADGRB2O60241 1585 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 PPIP5K1Q6PFW1 1433 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 GFRA2O00451 464 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 GREM1O60565 184 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 RPL6Q02878 288 aaKnown RBP9.75□□□□□ -0.85
UBE4B-204ENST00000462658 NKAPLQ5M9Q1 402 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 CYFIP1Q7L576 1253 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 ACSS3Q9H6R3 686 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 KCNQ5Q9NR82 932 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 UBP1Q9NZI7 540 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-204ENST00000462658 RAXQ9Y2V3 346 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 DAGLAQ9Y4D2 1042 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 SNCAIPQ9Y6H5 919 aa9.75□□□□□ -0.85
UBE4B-204ENST00000462658 BRD4O60885 1362 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-204ENST00000462658 CD163L1Q9NR16 1453 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-204ENST00000462658 HMX2A2RU54 273 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 BPNT1O95861 308 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 ERCC5P28715 1186 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-204ENST00000462658 NTF4P34130 210 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 CRKP46108 304 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 FAM196AQ6ZSG2 479 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 UBE3DQ7Z6J8 389 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 MORC1Q86VD1 984 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 KIAA0825Q8IV33 1275 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 ZNF654Q8IZM8 581 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 RNF214Q8ND24 703 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 ISL2Q96A47 359 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 EAF1Q96JC9 268 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-204ENST00000462658 SEMA6CQ9H3T2 930 aa9.74□□□□□ -0.85
UBE4B-204ENST00000462658 ATP7BP35670 1465 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 PPP2R1AP30153 589 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 NFKBIBQ15653 356 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 ZBTB37Q5TC79 503 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 SMYD4Q8IYR2 804 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-204ENST00000462658 FAM9BQ8IZU0 186 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 EZH1Q92800 747 aaPredicted RBP9.73□□□□□ -0.85
UBE4B-204ENST00000462658 ACBD3Q9H3P7 528 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 C7orf69Q9H7B7 122 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 STOML1Q9UBI4 398 aa9.73□□□□□ -0.85
UBE4B-204ENST00000462658 CPSF1Q10570 1443 aaKnown RBP9.73□□□□□ -0.85
UBE4B-204ENST00000462658 FAM95CA0A1B0GW59 222 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 FYB1O15117 783 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 DYNC1LI2O43237 492 aaPredicted RBP9.72□□□□□ -0.85
UBE4B-204ENST00000462658 TOM1O60784 492 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 CENPBP07199 599 aaPredicted RBP9.72□□□□□ -0.85
UBE4B-204ENST00000462658 CLEC10AQ8IUN9 316 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 FAM83CQ9BQN1 747 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 YIPF2Q9BWQ6 316 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 SSU72Q9NP77 194 aaKnown RBP9.72□□□□□ -0.85
UBE4B-204ENST00000462658 CORINQ9Y5Q5 1042 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 NSD2O96028 1365 aa9.72□□□□□ -0.85
UBE4B-204ENST00000462658 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.85
UBE4B-204ENST00000462658 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.85
UBE4B-204ENST00000462658 GRIN3BO60391 1043 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 H2AFB1P0C5Y9 115 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 H2AFB2P0C5Z0 115 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 GRK4P32298 578 aa9.71□□□□□ -0.86
UBE4B-204ENST00000462658 MPP2Q14168 576 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms