RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 APBA2Q99767 749 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 STAP2Q9UGK3 403 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 OGDHLQ9ULD0 1010 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 ADAMTS5Q9UNA0 930 aa10.97□□□□□ -0.65
BRCA1-207ENST00000461798 NAV1Q8NEY1 1877 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 ROBO3Q96MS0 1386 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 ZKSCAN1P17029 563 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-207ENST00000461798 MX1P20591 662 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 RASA1P20936 1047 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 CACNB2Q08289 660 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-207ENST00000461798 GRB14Q14449 540 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 CCL14Q16627 93 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 ZMYM1Q5SVZ6 1142 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 NECAB2Q7Z6G3 386 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 CLEC10AQ8IUN9 316 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 IFNL3Q8IZI9 196 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 PAWRQ96IZ0 340 aaKnown RBP10.96□□□□□ -0.65
BRCA1-207ENST00000461798 MOV10L1Q9BXT6 1211 aaKnown RBP10.96□□□□□ -0.65
BRCA1-207ENST00000461798 SPATC1LQ9H0A9 340 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 EPB41L4AQ9HCS5 686 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-207ENST00000461798 NR2E3Q9Y5X4 410 aa10.96□□□□□ -0.65
BRCA1-207ENST00000461798 PLXNB2O15031 1838 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 MINDY4BA8MYZ0 360 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 M0R2C6 588 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 ANKRD45Q5TZF3 282 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 ABRAQ8N0Z2 381 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 MKL1Q969V6 931 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 TANGO6Q9C0B7 1094 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 NBPF3Q9H094 633 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 MROH8Q9H579 483 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 MKNK2Q9HBH9 465 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 ZNF287Q9HBT7 754 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
BRCA1-207ENST00000461798 NYAP2Q9P242 653 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 IVNS1ABPQ9Y6Y0 642 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 CEP290O15078 2479 aa10.95□□□□□ -0.66
BRCA1-207ENST00000461798 FLOT1O75955 427 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 ERCC3P19447 782 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 MFSD14CQ5VZR4 134 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 ATG4CQ96DT6 458 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 NACAP1Q9BZK3 213 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 PRO3102Q9H379 93 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 GOPCQ9HD26 462 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 FLRT1Q9NZU1 646 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
BRCA1-207ENST00000461798 F5H6K3 240 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 SLC25A27O95847 323 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 APPP05067 770 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 COL6A1P12109 1028 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 CCND3P30281 292 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-207ENST00000461798 TDO2P48775 406 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 PDE1AP54750 535 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 KLRC3Q07444 240 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 WDR78Q5VTH9 848 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 OLFML2BQ68BL8 750 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 RIOX2Q8IUF8 465 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 ZNF444Q8N0Y2 327 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-207ENST00000461798 NPLOC4Q8TAT6 608 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 DIS3LQ8TF46 1054 aaKnown RBP10.93□□□□□ -0.66
BRCA1-207ENST00000461798 EVI5LQ96CN4 794 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
BRCA1-207ENST00000461798 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-207ENST00000461798 PPP1R9AQ9ULJ8 1098 aa10.93□□□□□ -0.66
BRCA1-207ENST00000461798 MYH7P12883 1935 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 BAZ2AQ9UIF9 1905 aaKnown RBP10.92□□□□□ -0.66
BRCA1-207ENST00000461798 VWA5AO00534 786 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 EVI5O60447 810 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 MSCO60682 206 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 COBLO75128 1261 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 ADORA2AP29274 412 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 TMEM132BQ14DG7 1078 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 DPP9Q86TI2 863 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 SMC5Q8IY18 1101 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 REPS2Q8NFH8 660 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 C11orf49Q9H6J7 331 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 FBXO28Q9NVF7 368 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 SLC5A4Q9NY91 659 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 MTMR4Q9NYA4 1195 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 RLFQ13129 1914 aa10.92□□□□□ -0.66
BRCA1-207ENST00000461798 FOXP2O15409 715 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 NDUFB10O96000 172 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 SLC3A2P08195 630 aaKnown RBP10.91□□□□□ -0.66
BRCA1-207ENST00000461798 FCER1AP12319 257 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 COPB2P35606 906 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 STAT3P40763 770 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 FXR1P51114 621 aaKnown RBP eCLIP10.91□□□□□ -0.66
BRCA1-207ENST00000461798 IRX5P78411 483 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-207ENST00000461798 PDE4BQ07343 736 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 ALX1Q15699 326 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 FAM83BQ5T0W9 1011 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 NCAPG2Q86XI2 1143 aa10.91□□□□□ -0.66
BRCA1-207ENST00000461798 NAPBQ9H115 298 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms