RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 NSUN3Q9H649 340 aaKnown RBP7.35□□□□□ -1.23
UBA3-204ENST00000461522 ZNRF3Q9ULT6 936 aa7.35□□□□□ -1.23
UBA3-204ENST00000461522 ARID1BQ8NFD5 2236 aaPredicted RBP7.34□□□□□ -1.23
UBA3-204ENST00000461522 TSPAN15O95858 294 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 VAMP1P23763 118 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 DUSP4Q13115 394 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 TIGD5Q53EQ6 642 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 TMEM192Q8IY95 271 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 ZNF655Q8N720 491 aaPredicted RBP7.34□□□□□ -1.23
UBA3-204ENST00000461522 FBXO15Q8NCQ5 510 aaPredicted RBP7.34□□□□□ -1.23
UBA3-204ENST00000461522 SYTL4Q96C24 671 aaPredicted RBP7.34□□□□□ -1.23
UBA3-204ENST00000461522 TCTN2Q96GX1 697 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 DIRC2Q96SL1 478 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 PPP1R16BQ96T49 567 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 SLC9A7Q96T83 725 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 G6PC3Q9BUM1 346 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 C19orf44Q9H6X5 657 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 PCDHGB7Q9Y5F8 929 aa7.34□□□□□ -1.23
UBA3-204ENST00000461522 RECKO95980 971 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 CHRNEQ04844 493 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 SYDE1Q6ZW31 735 aaPredicted RBP7.33□□□□□ -1.24
UBA3-204ENST00000461522 CILP2Q8IUL8 1156 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 HOMEZQ8IX15 550 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 ANKS4BQ8N8V4 417 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 RNF34Q969K3 372 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 ZNF512BQ96KM6 892 aaPredicted RBP7.33□□□□□ -1.24
UBA3-204ENST00000461522 SLC6A18Q96N87 628 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 PRDM14Q9GZV8 571 aa7.33□□□□□ -1.24
UBA3-204ENST00000461522 SIGLEC6O43699 453 aa7.32□□□□□ -1.24
UBA3-204ENST00000461522 PRAMEF1O95521 474 aa7.32□□□□□ -1.24
UBA3-204ENST00000461522 KRT1P04264 644 aa7.32□□□□□ -1.24
UBA3-204ENST00000461522 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
UBA3-204ENST00000461522 INTS3Q68E01 1043 aaKnown RBP7.32□□□□□ -1.24
UBA3-204ENST00000461522 SPPL2CQ8IUH8 684 aa7.32□□□□□ -1.24
UBA3-204ENST00000461522 LINC00116Q8NCU8 138 aa7.32□□□□□ -1.24
UBA3-204ENST00000461522 FOXP3Q9BZS1 431 aa7.32□□□□□ -1.24
UBA3-204ENST00000461522 EPB41L4BQ9H329 900 aa7.32□□□□□ -1.24
UBA3-204ENST00000461522 DDX41Q9UJV9 622 aaKnown RBP7.32□□□□□ -1.24
UBA3-204ENST00000461522 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
UBA3-204ENST00000461522 ACRP10323 421 aa7.31□□□□□ -1.24
UBA3-204ENST00000461522 IMPDH2P12268 514 aa7.31□□□□□ -1.24
UBA3-204ENST00000461522 RAP1GAPP47736 663 aa7.31□□□□□ -1.24
UBA3-204ENST00000461522 PCBP3P57721 371 aaKnown RBP7.31□□□□□ -1.24
UBA3-204ENST00000461522 BBS9Q3SYG4 887 aa7.31□□□□□ -1.24
UBA3-204ENST00000461522 TAB3Q8N5C8 712 aaPredicted RBP7.31□□□□□ -1.24
UBA3-204ENST00000461522 KCNK12Q9HB15 430 aa7.31□□□□□ -1.24
UBA3-204ENST00000461522 CWC22Q9HCG8 908 aaKnown RBP7.31□□□□□ -1.24
UBA3-204ENST00000461522 DCP1AQ9NPI6 582 aaPredicted RBP7.31□□□□□ -1.24
UBA3-204ENST00000461522 TCFL5Q9UL49 500 aa7.31□□□□□ -1.24
UBA3-204ENST00000461522 TMEM82A0PJX8 343 aa7.3□□□□□ -1.24
UBA3-204ENST00000461522 NOTOA8MTQ0 251 aa7.3□□□□□ -1.24
UBA3-204ENST00000461522 SCAMP3O14828 347 aaKnown RBP7.3□□□□□ -1.24
UBA3-204ENST00000461522 RPL10P27635 214 aaKnown RBP7.3□□□□□ -1.24
UBA3-204ENST00000461522 SNX17Q15036 470 aa7.3□□□□□ -1.24
UBA3-204ENST00000461522 IRF2BP1Q8IU81 584 aa7.3□□□□□ -1.24
UBA3-204ENST00000461522 SHISA4Q96DD7 197 aa7.3□□□□□ -1.24
UBA3-204ENST00000461522 MKRN2Q9H000 416 aaKnown RBP7.3□□□□□ -1.24
UBA3-204ENST00000461522 YBX2Q9Y2T7 364 aaKnown RBP7.3□□□□□ -1.24
UBA3-204ENST00000461522 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
UBA3-204ENST00000461522 MAP6Q96JE9 813 aa7.29□□□□□ -1.24
UBA3-204ENST00000461522 DHRS1Q96LJ7 313 aa7.29□□□□□ -1.24
UBA3-204ENST00000461522 SLC6A17Q9H1V8 727 aa7.29□□□□□ -1.24
UBA3-204ENST00000461522 CHST7Q9NS84 486 aa7.29□□□□□ -1.24
UBA3-204ENST00000461522 PRR13Q9NZ81 148 aa7.29□□□□□ -1.24
UBA3-204ENST00000461522 SUCOQ9UBS9 1254 aaKnown RBP7.29□□□□□ -1.24
UBA3-204ENST00000461522 MINPP1Q9UNW1 487 aa7.29□□□□□ -1.24
UBA3-204ENST00000461522 PSPNO60542 156 aa7.28□□□□□ -1.24
UBA3-204ENST00000461522 SYPP08247 313 aa7.28□□□□□ -1.24
UBA3-204ENST00000461522 C1QTNF9P0C862 333 aa7.28□□□□□ -1.24
UBA3-204ENST00000461522 KIR2DL1P43626 348 aaPredicted RBP7.28□□□□□ -1.24
UBA3-204ENST00000461522 KIR2DL2P43627 348 aaPredicted RBP7.28□□□□□ -1.24
UBA3-204ENST00000461522 AUHQ13825 339 aaKnown RBP7.28□□□□□ -1.24
UBA3-204ENST00000461522 METTL16Q86W50 562 aaKnown RBP7.28□□□□□ -1.24
UBA3-204ENST00000461522 RBBP8NLQ8NC74 664 aaPredicted RBP7.28□□□□□ -1.24
UBA3-204ENST00000461522 INTS4Q96HW7 963 aaKnown RBP7.28□□□□□ -1.24
UBA3-204ENST00000461522 FERD3LQ96RJ6 166 aa7.28□□□□□ -1.24
UBA3-204ENST00000461522 TM9SF2Q99805 663 aa7.28□□□□□ -1.24
UBA3-204ENST00000461522 GPR160Q9UJ42 338 aa7.28□□□□□ -1.24
UBA3-204ENST00000461522 PCDHB12Q9Y5F1 795 aa7.28□□□□□ -1.24
UBA3-204ENST00000461522 SSU72P8A0A1W2PR75 194 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 USP2O75604 605 aaPredicted RBP7.27□□□□□ -1.25
UBA3-204ENST00000461522 EFEMP2O95967 443 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 MED14OSP0DP75 135 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 NLRX1Q86UT6 975 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 SLC26A8Q96RN1 970 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 GFOD1Q9NXC2 390 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 ZMYM5Q9UJ78 669 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 PPT2Q9UMR5 302 aa7.27□□□□□ -1.25
UBA3-204ENST00000461522 C9IYK1 514 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 NFIBO00712 420 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 SHOXO15266 292 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 NRDCO43847 1150 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 FKTNO75072 461 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 GLDCP23378 1020 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 CTSKP43235 329 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 PMS1P54277 932 aaKnown RBP7.26□□□□□ -1.25
UBA3-204ENST00000461522 ZPBP2Q6X784 338 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 ZNF654Q8IZM8 581 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 HHIPL1Q96JK4 782 aa7.26□□□□□ -1.25
UBA3-204ENST00000461522 FBXL21Q9UKT6 434 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms