RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 BARHL2Q9NY43 387 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 BAZ2BQ9UIF8 2168 aaKnown RBP23.09■■□□□ 1.29
CCM2-203ENST00000461377 GOLGA8HP0CJ92 632 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 PTGDRQ13258 359 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 RASGRP2Q7LDG7 609 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 KIAA1524Q8TCG1 905 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 OSBPL5Q9H0X9 879 aaPredicted RBP23.09■■□□□ 1.29
CCM2-203ENST00000461377 DBNDD1Q9H9R9 158 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 SPTLC3Q9NUV7 552 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 PYCARDQ9ULZ3 195 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 ADAMTSL1Q8N6G6 1762 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 IGKV6D-41A0A0C4DH26 115 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 PRR29P0C7W0 189 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 SMARCA1P28370 1054 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 FKBP1AP62942 108 aaKnown RBP23.09■■□□□ 1.29
CCM2-203ENST00000461377 TPM4P67936 248 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 NOLC1Q14978 699 aaKnown RBP eCLIP23.09■■□□□ 1.29
CCM2-203ENST00000461377 SLC15A2Q16348 729 aa23.09■■□□□ 1.29
CCM2-203ENST00000461377 MYO3BQ8WXR4 1341 aa23.08■■□□□ 1.29
CCM2-203ENST00000461377 SARSP49591 514 aaKnown RBP23.08■■□□□ 1.29
CCM2-203ENST00000461377 CCDC144BQ3MJ40 725 aa23.08■■□□□ 1.29
CCM2-203ENST00000461377 HEATR3Q7Z4Q2 680 aa23.08■■□□□ 1.29
CCM2-203ENST00000461377 PDILTQ8N807 584 aa23.08■■□□□ 1.29
CCM2-203ENST00000461377 SYMPKQ92797 1274 aaKnown RBP23.08■■□□□ 1.29
CCM2-203ENST00000461377 EPSTI1Q96J88 318 aa23.08■■□□□ 1.29
CCM2-203ENST00000461377 SWAP70Q9UH65 585 aa23.08■■□□□ 1.29
CCM2-203ENST00000461377 A0A087X0B3 334 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 CRKP46108 304 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 USP17L2Q6R6M4 530 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 MTMR4Q9NYA4 1195 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 MAN1B1Q9UKM7 699 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 AKR1B1P15121 316 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 BMP6P22004 513 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 MRIQ9BWK5 157 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 KCNQ5Q9NR82 932 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 SERPINB13Q9UIV8 391 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 PCDHA6Q9UN73 950 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 PCDHA8Q9Y5H6 950 aa23.07■■□□□ 1.28
CCM2-203ENST00000461377 SLX4Q8IY92 1834 aa23.06■■□□□ 1.28
CCM2-203ENST00000461377 STRIP1Q5VSL9 837 aa23.06■■□□□ 1.28
CCM2-203ENST00000461377 C17orf53Q8N3J3 647 aaPredicted RBP23.06■■□□□ 1.28
CCM2-203ENST00000461377 CNKSR1Q969H4 720 aa23.06■■□□□ 1.28
CCM2-203ENST00000461377 ZDHHC15Q96MV8 337 aa23.06■■□□□ 1.28
CCM2-203ENST00000461377 VWA3AA6NCI4 1184 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 CHRNA5P30532 468 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 MCM7P33993 719 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 MYL5Q02045 173 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 EZH2Q15910 746 aaKnown RBP23.05■■□□□ 1.28
CCM2-203ENST00000461377 DACT2Q5SW24 774 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 SPATA20Q8TB22 786 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 RASGRP4Q8TDF6 673 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 SMARCE1Q969G3 411 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 DHX58Q96C10 678 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 CAMKK2Q96RR4 588 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 HSD3B7Q9H2F3 369 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 CPVLQ9H3G5 476 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 ECE2O60344 883 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 SLFN14P0C7P3 912 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 SH3RF1Q7Z6J0 888 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 GRAMD1CQ8IYS0 662 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 C4orf32Q8N8J7 132 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 TRIML1Q8N9V2 468 aa23.05■■□□□ 1.28
CCM2-203ENST00000461377 CCDC194A0A1B0GVG4 234 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 USP17L5A8MUK1 530 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 PDHBP11177 359 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 SHMT1P34896 483 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 MORC3Q14149 939 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 ARL6IP4Q66PJ3 421 aaKnown RBP23.04■■□□□ 1.28
CCM2-203ENST00000461377 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 RRP36Q96EU6 259 aaKnown RBP23.04■■□□□ 1.28
CCM2-203ENST00000461377 CCDC34Q96HJ3 373 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 ZMYND12Q9H0C1 365 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 STK32BQ9NY57 414 aa23.04■■□□□ 1.28
CCM2-203ENST00000461377 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
CCM2-203ENST00000461377 HDLBPQ00341 1268 aaKnown RBP23.03■■□□□ 1.28
CCM2-203ENST00000461377 LRMPQ12912 555 aa23.03■■□□□ 1.28
CCM2-203ENST00000461377 IL17AQ16552 155 aa23.03■■□□□ 1.28
CCM2-203ENST00000461377 CCDC12Q8WUD4 166 aaPredicted RBP23.03■■□□□ 1.28
CCM2-203ENST00000461377 CACTINQ8WUQ7 758 aaKnown RBP23.03■■□□□ 1.28
CCM2-203ENST00000461377 ZNF646O15015 1829 aaPredicted RBP23.03■■□□□ 1.28
CCM2-203ENST00000461377 SNHG28P0DPA3 235 aa23.03■■□□□ 1.28
CCM2-203ENST00000461377 NFIAQ12857 509 aa23.03■■□□□ 1.28
CCM2-203ENST00000461377 EHD4Q9H223 541 aa23.03■■□□□ 1.28
CCM2-203ENST00000461377 RIOX1Q9H6W3 641 aa23.03■■□□□ 1.28
CCM2-203ENST00000461377 RGS17Q9UGC6 210 aaPredicted RBP23.03■■□□□ 1.28
CCM2-203ENST00000461377 ASPRV1Q53RT3 343 aa23.02■■□□□ 1.28
CCM2-203ENST00000461377 MLKLQ8NB16 471 aa23.02■■□□□ 1.28
CCM2-203ENST00000461377 PAGE5Q96GU1 130 aa23.02■■□□□ 1.28
CCM2-203ENST00000461377 XPO4Q9C0E2 1151 aaKnown RBP23.02■■□□□ 1.28
CCM2-203ENST00000461377 IFNKQ9P0W0 207 aa23.02■■□□□ 1.28
CCM2-203ENST00000461377 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
CCM2-203ENST00000461377 MYO1BO43795 1136 aa23.01■■□□□ 1.27
CCM2-203ENST00000461377 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
CCM2-203ENST00000461377 TERF1P54274 439 aa23.01■■□□□ 1.27
CCM2-203ENST00000461377 NAPAP54920 295 aa23.01■■□□□ 1.27
CCM2-203ENST00000461377 EN1Q05925 392 aaPredicted RBP23.01■■□□□ 1.27
CCM2-203ENST00000461377 KIAA0825Q8IV33 1275 aa23.01■■□□□ 1.27
CCM2-203ENST00000461377 SEC63Q9UGP8 760 aaKnown RBP23.01■■□□□ 1.27
CCM2-203ENST00000461377 SMC2O95347 1197 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms