RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 FEZ1Q99689 392 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 KAT14Q9H8E8 782 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.86■□□□□ 0.29
COL5A3-202ENST00000461214 KCNH4Q9UQ05 1017 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 AFG3L2Q9Y4W6 797 aa16.86■□□□□ 0.29
COL5A3-202ENST00000461214 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 USP17L10C9JJH3 530 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 DDAH1O94760 285 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 EVCP57679 992 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 TOB2Q14106 344 aaPredicted RBP16.85■□□□□ 0.29
COL5A3-202ENST00000461214 OTUD7BQ6GQQ9 843 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 SIAH1Q8IUQ4 282 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 PNMA1Q8ND90 353 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 LPAR1Q92633 364 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 TMEM47Q9BQJ4 181 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 LRRC2Q9BYS8 371 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 CLIP2Q9UDT6 1046 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 ZHX2Q9Y6X8 837 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 SZT2Q5T011 3432 aa16.85■□□□□ 0.29
COL5A3-202ENST00000461214 MGAMO43451 1857 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 CXCL11O14625 94 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 CALM1P0DP23 149 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 CALM2P0DP24 149 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 CALM3P0DP25 149 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 MCM2P49736 904 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 BACE1P56817 501 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 ATP2B2Q01814 1243 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 MTMR2Q13614 643 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 SH3D19Q5HYK7 790 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 APOA5Q6Q788 366 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
COL5A3-202ENST00000461214 BRF1Q92994 677 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 C12orf42Q96LP6 360 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 MAP3K14Q99558 947 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 VCPKMTQ9H867 229 aa16.84■□□□□ 0.29
COL5A3-202ENST00000461214 A0A1W2PRG0 241 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 TRIM75PA6NK02 468 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 IRF6O14896 467 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 BRCA2P51587 3418 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 AK2P54819 239 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 SPP2Q13103 211 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 NFXL1Q6ZNB6 911 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 CATIPQ7Z7H3 387 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 CCDC84Q86UT8 332 aaPredicted RBP16.83■□□□□ 0.28
COL5A3-202ENST00000461214 PROCA1Q8NCQ7 364 aaPredicted RBP16.83■□□□□ 0.28
COL5A3-202ENST00000461214 ACER1Q8TDN7 264 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 SH3TC2Q8TF17 1288 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 SLC12A7Q9Y666 1083 aa16.83■□□□□ 0.28
COL5A3-202ENST00000461214 A0A0G2JLL6 359 aaPredicted RBP16.82■□□□□ 0.28
COL5A3-202ENST00000461214 SNAPC2Q13487 334 aa16.82■□□□□ 0.28
COL5A3-202ENST00000461214 USP17L2Q6R6M4 530 aa16.82■□□□□ 0.28
COL5A3-202ENST00000461214 SYNE3Q6ZMZ3 975 aa16.82■□□□□ 0.28
COL5A3-202ENST00000461214 PRRT2Q7Z6L0 340 aaPredicted RBP16.82■□□□□ 0.28
COL5A3-202ENST00000461214 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
COL5A3-202ENST00000461214 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
COL5A3-202ENST00000461214 GMCL1Q96IK5 515 aa16.82■□□□□ 0.28
COL5A3-202ENST00000461214 GPHNQ9NQX3 736 aaPredicted RBP16.82■□□□□ 0.28
COL5A3-202ENST00000461214 BAZ2BQ9UIF8 2168 aaKnown RBP16.81■□□□□ 0.28
COL5A3-202ENST00000461214 KLF18A0A0U1RQI7 1052 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
COL5A3-202ENST00000461214 NDUFB10O96000 172 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 SNHG28P0DPA3 235 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 GJA5P36382 358 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 GTF2A2P52657 109 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 TROAPQ12815 778 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 PPP2R5BQ15173 497 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
COL5A3-202ENST00000461214 PTPN18Q99952 460 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 SENP2Q9HC62 589 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 TMOD4Q9NZQ9 345 aa16.81■□□□□ 0.28
COL5A3-202ENST00000461214 CEP290O15078 2479 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 PLXNB2O15031 1838 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 GOLGA8BA8MQT2 603 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 F5H6K3 240 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 ZBTB43O43298 467 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 ECM2O94769 699 aaPredicted RBP16.8■□□□□ 0.28
COL5A3-202ENST00000461214 PDHBP11177 359 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 HMGCS2P54868 508 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 KLRC3Q07444 240 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 ASPRV1Q53RT3 343 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 GPATCH4Q5T3I0 446 aaKnown RBP16.8■□□□□ 0.28
COL5A3-202ENST00000461214 FASTKD5Q7L8L6 764 aaKnown RBP16.8■□□□□ 0.28
COL5A3-202ENST00000461214 BRPF3Q9ULD4 1205 aa16.8■□□□□ 0.28
COL5A3-202ENST00000461214 MYH15Q9Y2K3 1946 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 CETPP11597 493 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 VCAM1P19320 739 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 KIF5BP33176 963 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 GRM4Q14833 912 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 ZYXQ15942 572 aaKnown RBP16.79■□□□□ 0.28
COL5A3-202ENST00000461214 SLFN13Q68D06 897 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 MICU3Q86XE3 530 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
COL5A3-202ENST00000461214 SNX21Q969T3 373 aa16.79■□□□□ 0.28
COL5A3-202ENST00000461214 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
COL5A3-202ENST00000461214 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
COL5A3-202ENST00000461214 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms