RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TRMT2AQ8IZ69 625 aaKnown RBP20.9■□□□□ 0.94
TOP3A-202ENST00000461127 UHRF1Q96T88 793 aaPredicted RBP20.9■□□□□ 0.94
TOP3A-202ENST00000461127 MMP19Q99542 508 aa20.9■□□□□ 0.94
TOP3A-202ENST00000461127 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.9■□□□□ 0.944e-8■■■■□ 21.2
TOP3A-202ENST00000461127 MROH7Q68CQ1 1323 aa20.89■□□□□ 0.93
TOP3A-202ENST00000461127 SAMD1Q6SPF0 538 aaPredicted RBP20.89■□□□□ 0.93
TOP3A-202ENST00000461127 ATG4CQ96DT6 458 aa20.89■□□□□ 0.93
TOP3A-202ENST00000461127 PRDM12Q9H4Q4 367 aa20.89■□□□□ 0.93
TOP3A-202ENST00000461127 SH2D4AQ9H788 454 aa20.89■□□□□ 0.93
TOP3A-202ENST00000461127 CNPY2Q9Y2B0 182 aa20.89■□□□□ 0.93
TOP3A-202ENST00000461127 DIS3Q9Y2L1 958 aaKnown RBP20.89■□□□□ 0.93
TOP3A-202ENST00000461127 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
TOP3A-202ENST00000461127 RARSP54136 660 aaKnown RBP20.88■□□□□ 0.93
TOP3A-202ENST00000461127 GABPAQ06546 454 aa20.88■□□□□ 0.93
TOP3A-202ENST00000461127 KCTD2Q14681 263 aa20.88■□□□□ 0.93
TOP3A-202ENST00000461127 MFSD5Q6N075 450 aa20.88■□□□□ 0.93
TOP3A-202ENST00000461127 TMEM179Q6ZVK1 233 aa20.88■□□□□ 0.93
TOP3A-202ENST00000461127 PBX4Q9BYU1 374 aa20.88■□□□□ 0.93
TOP3A-202ENST00000461127 ARHGEF10LQ9HCE6 1279 aa20.88■□□□□ 0.93
TOP3A-202ENST00000461127 MOXD2PA6NHM9 499 aa20.87■□□□□ 0.93
TOP3A-202ENST00000461127 ACLYP53396 1101 aa20.87■□□□□ 0.93
TOP3A-202ENST00000461127 TSPYL2Q9H2G4 693 aaPredicted RBP20.87■□□□□ 0.93
TOP3A-202ENST00000461127 DBNLQ9UJU6 430 aaKnown RBP20.87■□□□□ 0.93
TOP3A-202ENST00000461127 BDP1A6H8Y1 2624 aa20.87■□□□□ 0.93
TOP3A-202ENST00000461127 ADAMTS4O75173 837 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 SURF6O75683 361 aaKnown RBP20.86■□□□□ 0.93
TOP3A-202ENST00000461127 PGK2P07205 417 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 IGFBP4P22692 258 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 CCDC85BQ15834 202 aaPredicted RBP20.86■□□□□ 0.93
TOP3A-202ENST00000461127 SPICE1Q8N0Z3 855 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 CRNKL1Q9BZJ0 848 aaKnown RBP20.86■□□□□ 0.93
TOP3A-202ENST00000461127 MCM9Q9NXL9 1143 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 MSRAQ9UJ68 235 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 TBX21Q9UL17 535 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 PLXNA1Q9UIW2 1896 aa20.86■□□□□ 0.93
TOP3A-202ENST00000461127 MAGEB6P1A0A0J9YX57 407 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 WDR46O15213 610 aaKnown RBP20.85■□□□□ 0.93
TOP3A-202ENST00000461127 ZNF865P0CJ78 1059 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-202ENST00000461127 TAL1P17542 331 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-202ENST00000461127 COPB2P35606 906 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 PBX2P40425 430 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 POLA2Q14181 598 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 TMEM132BQ14DG7 1078 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 RAB30Q15771 203 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 ZNF792Q3KQV3 632 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 KIAA1755Q5JYT7 1200 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 TMEM240Q5SV17 173 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 PSRC1Q6PGN9 363 aaPredicted RBP20.85■□□□□ 0.93
TOP3A-202ENST00000461127 RIOX2Q8IUF8 465 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 TMEM199Q8N511 208 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 GLT1D1Q96MS3 346 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 NAV1Q8NEY1 1877 aa20.85■□□□□ 0.93
TOP3A-202ENST00000461127 SYNRGQ9UMZ2 1314 aa20.84■□□□□ 0.93
TOP3A-202ENST00000461127 LENG1Q96BZ8 264 aaPredicted RBP20.84■□□□□ 0.93
TOP3A-202ENST00000461127 RIOK1Q9BRS2 568 aaKnown RBP20.84■□□□□ 0.93
TOP3A-202ENST00000461127 C1QTNF1Q9BXJ1 281 aa20.84■□□□□ 0.93
TOP3A-202ENST00000461127 CCDC8Q9H0W5 538 aaPredicted RBP20.84■□□□□ 0.93
TOP3A-202ENST00000461127 VCPKMTQ9H867 229 aa20.84■□□□□ 0.93
TOP3A-202ENST00000461127 SWAP70Q9UH65 585 aa20.84■□□□□ 0.93
TOP3A-202ENST00000461127 FAM184BQ9ULE4 1060 aa20.84■□□□□ 0.93
TOP3A-202ENST00000461127 TMX2Q9Y320 296 aa20.84■□□□□ 0.93
TOP3A-202ENST00000461127 ELP1O95163 1332 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 GRXCR1A8MXD5 290 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 APBB1O00213 710 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 ICA1Q05084 483 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 KCNA10Q16322 511 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 RASIP1Q5U651 963 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 MSL3Q8N5Y2 521 aaKnown RBP20.83■□□□□ 0.93
TOP3A-202ENST00000461127 SSH3Q8TE77 659 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 VTI1AQ96AJ9 217 aa20.83■□□□□ 0.93
TOP3A-202ENST00000461127 MTIF3Q9H2K0 278 aaKnown RBP20.83■□□□□ 0.93
TOP3A-202ENST00000461127 TLR7Q9NYK1 1049 aaKnown RBP20.83■□□□□ 0.93
TOP3A-202ENST00000461127 TRIM27P14373 513 aa20.82■□□□□ 0.92
TOP3A-202ENST00000461127 STAT3P40763 770 aa20.82■□□□□ 0.92
TOP3A-202ENST00000461127 C16orf59Q7L2K0 433 aa20.82■□□□□ 0.92
TOP3A-202ENST00000461127 PCSK9Q8NBP7 692 aaKnown RBP20.82■□□□□ 0.92
TOP3A-202ENST00000461127 KLHDC9Q8NEP7 349 aa20.82■□□□□ 0.92
TOP3A-202ENST00000461127 ANTXR1Q9H6X2 564 aa20.82■□□□□ 0.92
TOP3A-202ENST00000461127 SPC25Q9HBM1 224 aa20.82■□□□□ 0.92
TOP3A-202ENST00000461127 CSF2RAP15509 400 aa20.81■□□□□ 0.92
TOP3A-202ENST00000461127 ADGRE1Q14246 886 aa20.81■□□□□ 0.92
TOP3A-202ENST00000461127 ZNF365Q70YC5 407 aa20.81■□□□□ 0.92
TOP3A-202ENST00000461127 SLC28A3Q9HAS3 691 aa20.81■□□□□ 0.92
TOP3A-202ENST00000461127 ADAMTS5Q9UNA0 930 aa20.81■□□□□ 0.92
TOP3A-202ENST00000461127 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
TOP3A-202ENST00000461127 ZBED9Q6R2W3 1325 aa20.8■□□□□ 0.92
TOP3A-202ENST00000461127 MYH8P13535 1937 aa20.8■□□□□ 0.92
TOP3A-202ENST00000461127 TLR3O15455 904 aaKnown RBP20.8■□□□□ 0.92
TOP3A-202ENST00000461127 DUSP11O75319 330 aaKnown RBP20.8■□□□□ 0.92
TOP3A-202ENST00000461127 ACRP10323 421 aa20.8■□□□□ 0.92
TOP3A-202ENST00000461127 ATP8B2P98198 1209 aa20.8■□□□□ 0.92
TOP3A-202ENST00000461127 TTF1Q15361 905 aaPredicted RBP20.8■□□□□ 0.92
TOP3A-202ENST00000461127 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
TOP3A-202ENST00000461127 EAF2Q96CJ1 260 aaPredicted RBP20.8■□□□□ 0.92
TOP3A-202ENST00000461127 PARP14Q460N5 1801 aa20.8■□□□□ 0.92
TOP3A-202ENST00000461127 SYNGAP1Q96PV0 1343 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 A0A0U1RQG5 324 aaPredicted RBP20.79■□□□□ 0.92
TOP3A-202ENST00000461127 VWA5AO00534 786 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 BCAR3O75815 825 aa20.79■□□□□ 0.92
TOP3A-202ENST00000461127 C6orf222P0C671 652 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms