RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 PRR29P0C7W0 189 aa15.89■□□□□ 0.13
PTPRN-210ENST00000460801 SMARCA1P28370 1054 aa15.89■□□□□ 0.13
PTPRN-210ENST00000460801 RXRBP28702 533 aa15.89■□□□□ 0.13
PTPRN-210ENST00000460801 PICALMQ13492 652 aa15.89■□□□□ 0.13
PTPRN-210ENST00000460801 PODNQ7Z5L7 613 aa15.89■□□□□ 0.13
PTPRN-210ENST00000460801 CCDC148Q8NFR7 591 aa15.89■□□□□ 0.13
PTPRN-210ENST00000460801 CACTINQ8WUQ7 758 aaKnown RBP15.89■□□□□ 0.13
PTPRN-210ENST00000460801 SYMPKQ92797 1274 aaKnown RBP15.89■□□□□ 0.13
PTPRN-210ENST00000460801 ZNF622Q969S3 477 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTPRN-210ENST00000460801 MAN1B1Q9UKM7 699 aa15.89■□□□□ 0.13
PTPRN-210ENST00000460801 STXBP3O00186 592 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 PARP1P09874 1014 aaKnown RBP15.88■□□□□ 0.13
PTPRN-210ENST00000460801 GOLGA8HP0CJ92 632 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 MYL5Q02045 173 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 STYK1Q6J9G0 422 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 SH3RF1Q7Z6J0 888 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 C2CD5Q86YS7 1000 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 USP40Q9NVE5 1235 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 MTMR7Q9Y216 660 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
PTPRN-210ENST00000460801 G3V3G9 751 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 SLFN14P0C7P3 912 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 SCNN1DP51172 638 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 MORC3Q14149 939 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 RASGRP2Q7LDG7 609 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 GRAMD1CQ8IYS0 662 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 TRIML1Q8N9V2 468 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 SMARCE1Q969G3 411 aa15.88■□□□□ 0.13
PTPRN-210ENST00000460801 VWA3AA6NCI4 1184 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
PTPRN-210ENST00000460801 APOBEC3HQ6NTF7 200 aaKnown RBP15.87■□□□□ 0.13
PTPRN-210ENST00000460801 CDC42EP5Q6NZY7 148 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 HEATR3Q7Z4Q2 680 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 LRRC8AQ8IWT6 810 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 C4orf32Q8N8J7 132 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 TEKT1Q969V4 418 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 DHX58Q96C10 678 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 XPO4Q9C0E2 1151 aaKnown RBP15.87■□□□□ 0.13
PTPRN-210ENST00000460801 MTMR4Q9NYA4 1195 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 IFNKQ9P0W0 207 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 PCDHA6Q9UN73 950 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 PCDHA8Q9Y5H6 950 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 IGKV6D-41A0A0C4DH26 115 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 H0YIN7 160 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 NEMFO60524 1076 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 LMOD1P29536 600 aaPredicted RBP15.87■□□□□ 0.13
PTPRN-210ENST00000460801 MCM7P33993 719 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 USP17L2Q6R6M4 530 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 MLKLQ8NB16 471 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 CCDC34Q96HJ3 373 aa15.87■□□□□ 0.13
PTPRN-210ENST00000460801 MYO3BQ8WXR4 1341 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 MYO1BO43795 1136 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 IL17AQ16552 155 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 RASGRP4Q8TDF6 673 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 MRIQ9BWK5 157 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 ZMYND12Q9H0C1 365 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 OSBPL5Q9H0X9 879 aaPredicted RBP15.86■□□□□ 0.13
PTPRN-210ENST00000460801 IMPACTQ9P2X3 320 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 SWAP70Q9UH65 585 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 MYH8P13535 1937 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 ADAMTSL1Q8N6G6 1762 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 SLX4Q8IY92 1834 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 CCDC194A0A1B0GVG4 234 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 AKR1B1P15121 316 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 FKBP1AP62942 108 aaKnown RBP15.86■□□□□ 0.13
PTPRN-210ENST00000460801 FANCCQ00597 558 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 PAGE5Q96GU1 130 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 CPVLQ9H3G5 476 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 DBNDD1Q9H9R9 158 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 KCNQ5Q9NR82 932 aa15.86■□□□□ 0.13
PTPRN-210ENST00000460801 SMC2O95347 1197 aa15.85■□□□□ 0.13
PTPRN-210ENST00000460801 TPM2P07951 284 aa15.85■□□□□ 0.13
PTPRN-210ENST00000460801 ATP1A3P13637 1013 aa15.85■□□□□ 0.13
PTPRN-210ENST00000460801 ARID5BQ14865 1188 aa15.85■□□□□ 0.13
PTPRN-210ENST00000460801 RRP36Q96EU6 259 aaKnown RBP15.85■□□□□ 0.13
PTPRN-210ENST00000460801 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
PTPRN-210ENST00000460801 DACH1Q9UI36 760 aa15.85■□□□□ 0.13
PTPRN-210ENST00000460801 USP17L5A8MUK1 530 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 PDHBP11177 359 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 CRKP46108 304 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 GSDMDP57764 484 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 E2F4Q16254 413 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 DNTTIP2Q5QJE6 756 aaKnown RBP15.84■□□□□ 0.13
PTPRN-210ENST00000460801 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 FILIP1Q7Z7B0 1213 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 CCDC12Q8WUD4 166 aaPredicted RBP15.84■□□□□ 0.13
PTPRN-210ENST00000460801 ZDHHC15Q96MV8 337 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 RIOX1Q9H6W3 641 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 SNHG28P0DPA3 235 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 SHMT1P34896 483 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 LONP1P36776 959 aaKnown RBP15.84■□□□□ 0.13
PTPRN-210ENST00000460801 PYM1Q9BRP8 204 aaKnown RBP15.84■□□□□ 0.13
PTPRN-210ENST00000460801 FANCLQ9NW38 375 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 SCN9AQ15858 1988 aa15.84■□□□□ 0.13
PTPRN-210ENST00000460801 DPYDQ12882 1025 aa15.83■□□□□ 0.13
PTPRN-210ENST00000460801 DACT2Q5SW24 774 aa15.83■□□□□ 0.13
PTPRN-210ENST00000460801 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms